Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq62471 86.0 3e-11
seq39868 84.2 9e-11
>seq62471
Length=361
Score = 86.0 bits (94), Expect = 3e-11
Identities = 95/126 (75%), Gaps = 3/126 (2%)
Strand=Plus/Plus
Query 351147 GGTTGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACC 351206
|||||| || || |||| | | || || |||| |||||||| |||| ||||||
Sbjct 58 GGTTGAGGCGGAAGGTGGACCAGGGCAGGATGCGG---ACGCGGTGGCCCATCATGGACA 114
Query 351207 CGTTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCT 351266
||||| |||||||||||||| ||| ||||| |||||| || || | || ||| ||||
Sbjct 115 TCTTGTGCAGCGTGGGCTGGCGGTTGAAGATGACGATGTCCCCGTCACACATGTGTCTCT 174
Query 351267 CCACCT 351272
||||||
Sbjct 175 CCACCT 180
>seq39868
Length=428
Score = 84.2 bits (92), Expect = 9e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 349085 TCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAG 349144
||||| || | ||| | ||||||||| ||||||||||||| ||| || || ||||||||
Sbjct 352 TCCTTCAGCCGGGGGACGCCCAGGGTGACGTTCTTGGCCGAGACCCCCGCGTAGTGGAAG 293
Query 349145 GTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACC 349204
|| | |||||||| ||| ||| || || || | | |||| | || || || |||
Sbjct 292 GTGTTGAGGGTCATCTGGGTGGCCGGTTCTCCCAGGGACTGAGCTGCCAGCGCCCCCACC 233
Query 349205 ATCTCGCCGGG 349215
||||| || ||
Sbjct 232 ATCTCCCCAGG 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2082820507671356
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |