Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq2349 123 4e-26 >seq2349 Length=7325165 Score = 123 bits (136), Expect = 4e-26 Identities = 171/234 (73%), Gaps = 4/234 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||| || |||| | || ||| ||||| | | |||||| |||||| | Sbjct 1247076 GTACAAAGGGCAGGGACTTAATCAATGTGAACTT-ATGACCCACACTTACTGGGAATT-C 1247133 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TT 119 |||||| | | || ||||||||| |||||||||| || ||||| | || Sbjct 1247134 CTCGTTCACGGGGAAGAATTGCAATCCCTGATCCCCATCATGAATGGGGTTCAATGGGTT 1247193 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| |||| ||| ||| | || | ||| |||||||||| || |||| Sbjct 1247194 ACCCGCGCCTGCTGGCGGAGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGCATGCATGCG 1247253 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| | |||||||||||||||||||||| |||||| ||||| || ||||| Sbjct 1247254 GCCCCGGACATCTAAGGGCATCACAGACCCATTATTG-CTCAATCTCGGGTGGC 1247306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751922254480