Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq541 89.7 9e-16 >seq541 Length=894454 Score = 89.7 bits (98), Expect = 9e-16 Identities = 127/176 (72%), Gaps = 2/176 (1%) Strand=Plus/Minus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||| | ||||||||||||||||||| | | | | | |||||||| ||||| Sbjct 752644 GAATAGGAC-TCTGGTTCTATTTTGTTGGTTTTTGGAAATGGGGACATGATTAAGAGGGA 752586 Query 200 TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTA 259 | |||||| | || || || ||||||||||||||||||| |||| Sbjct 752585 CGGCCGGGGGCATTCGTGTTGTGCTGCTAGAGGTGAAATTCTTGGATAGGCGCAAGATGG 752526 Query 260 ACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 ||| | |||||| || |||| |||||||||||||||| |||| ||||| || Sbjct 752525 CCTAGAGTGAAAGCATTTGCCAATAATGTTTTCATTAATCA-AGAACAAAAGTCAG 752471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915102329856