Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq689 170 3e-40 >seq689 Length=5479 Score = 170 bits (188), Expect = 3e-40 Identities = 191/253 (75%), Gaps = 7/253 (3%) Strand=Plus/Minus Query 2 TTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCACG 61 ||| ||||||| |||||||||||| ||| || ||||| || |||| | || || ||| Sbjct 4176 TTAACCTTCCAGCACCGGGCAGGCATCACACCCTATACGTCCACTTTC-GTGTTTGCAGA 4118 Query 62 GACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTC-- 119 | ||||||||||| |||||||| || | || | |||||||| ||| |||| Sbjct 4117 GTGCTGTGTTTTTAATAAACAGTTGCAGCGGCCTGGTATCTGCGACTGCCAATAGCTTTG 4058 Query 120 ---AACACGTCGT-TCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTG 175 | || ||| |||||| | | || ||||||||||||||||||| |||||||| Sbjct 4057 TAGAGCATGTCTACTCACCATCGGCAGCGTACCTTCTCCCGAAGTTACGGTACCATTTTG 3998 Query 176 CCGAATTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTG 235 || | |||||| | || ||||| | | | |||||| |||||||||||||||||||||||| Sbjct 3997 CCTAGTTCCTTCAGCAGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCTGACCACCTGTG 3938 Query 236 TCGGTTTACGGTA 248 ||||||| |||| Sbjct 3937 TCGGTTTCGGGTA 3925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694328209456