Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq689 363 3e-98 >seq689 Length=5479 Score = 363 bits (402), Expect = 3e-98 Identities = 285/335 (85%), Gaps = 8/335 (2%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| | ||| ||||||| |||||||||||||| |||||||||||| || | ||| Sbjct 565 CTTTACAACCAAAAGGCCTTCTT-CACACACGCGGCAT-GGCTGGATCAGGGTTGCCCCC 508 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | Sbjct 507 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCCGGACCGTGTCTCAGTTCCGG 448 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| || Sbjct 447 TGTGACTGATCATCCTCTCAGACCAGTTACAGATCGTCGCCTTGGTGGGCCTTTACCCCA 388 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 |||||||||||||| || ||||||||||| ||| ||||| | | |||| ||| Sbjct 387 CCAACTAGCTAATCTGATTTAGGCTCATCTAATA--GCAAGAGC--TTGCGCCCC--CTT 334 Query 241 TCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACCAG 300 || |||||||| |||||||||||||| |||||| | ||||||||||||| || Sbjct 333 TCACCCGTAGGTCGTATGCGGTATTAATTCGAGTTTCCCCGAGCTATCCCCCACTACTAG 274 Query 301 GCAGATTCCTAGGCATTACTCACCCGTCCGCCGCT 335 ||||||||||| ||||||||||||||||| || Sbjct 273 GCAGATTCCTAAATGTTACTCACCCGTCCGCCACT 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071885596160