Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq689 354 2e-95 >seq689 Length=5479 Score = 354 bits (392), Expect = 2e-95 Identities = 330/414 (80%), Gaps = 10/414 (2%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCC 60 || |||||||||| ||||||||||||| |||||||||||||||| |||||| |||| || Sbjct 568 GTGCTTTACAACCAAAAGGCCTTCTTCACACACGCGGCATGGCTGGATCAGGGTTGCCCC 509 Query 61 CATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCA 120 |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 508 CATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCCGGACCGTGTCTCAGTTCCG 449 Query 121 GTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCC 180 ||||| ||| ||||||||||||||||| || ||||||||||| |||||||| ||||||| Sbjct 448 GTGTGACTGATCATCCTCTCAGACCAGTTACAGATCGTCGCCTTGGTGGGCCTTTACCCC 389 Query 181 GCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCT 240 |||||||||||||| || | || ||||| |||| |||| | |||||| | Sbjct 388 ACCAACTAGCTAATCTGATTTAGGCTCATCTAATAGCAAGAG----CTTGCGCCCCCT-T 334 Query 241 TTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCA 300 | | | | || |||||||||||| |||||| | |||||||| | | | Sbjct 333 TCACCCGTAGGTCG-TATGCGGTATTAATTCGAGTTTCCCCGAGCTATCCCCCACTACTA 275 Query 301 GGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGCAAGCTGCTT 360 ||||| |||| | | |||||||||||||||||||| ||| | |||||||| | Sbjct 274 GGCAGATTCCTAAATGTTACTCACCCGTCCGCCACTAATCA--TATCTAGCAAGCTAGAT 217 Query 361 CCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 | | |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 216 --AATCATCGTTCGACTTGCATGTGTTAAGCCTGCCGCCAGCGTTCAATCTGAG 165 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222269545472