Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq689 275 2e-71 >seq689 Length=5479 Score = 275 bits (304), Expect = 2e-71 Identities = 276/362 (76%), Gaps = 26/362 (7%) Strand=Plus/Plus Query 164 TCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGA 223 || ||||||||||||||| ||||| ||| ||||||||||||||| ||| | | |||| Sbjct 371 TCAGATTAGCTAGTTGGTGGGGTAAAGGCCCACCAAGGCGACGATCTGTAACTGGTCTGA 430 Query 224 GAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGT 283 |||| ||||| | |||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 431 GAGGATGATCAGTCACACCGGAACTGAGACACGGTCCGGACTCCTACGGGAGGCAGCAGT 490 Query 284 GGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGC 343 ||||||||||| |||||||| || |||||| |||| | |||||||| | || |||||| Sbjct 491 GGGGAATATTGGACAATGGGGGCAACCCTGATCCAGCCATGCCGCGTGTGTGAAGAAGGC 550 Query 344 CTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-----TAAT------------------ 380 ||| ||| ||||||| || | || ||| || |||| Sbjct 551 CTTTTGGTTGTAAAGCACTTTAAGCAGGGAGGAGAGGCTAATGGTTAATACCCATTAGAT 610 Query 381 --GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGT 438 |||| ||| || || |||| |||||||||| |||||||||||||||||||||| Sbjct 611 TAGACGTTACCTGCAGAATAAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAG 670 Query 439 AGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAG 498 |||| || ||||||| |||||||||| |||||||||| | | |||||||| | ||||| Sbjct 671 AGGGTGCGAGCGTTAATCGGAATTACT-GGGCGTAAAGCGAGTGTAGGTGGCTCATTAAG 729 Query 499 TC 500 || Sbjct 730 TC 731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497440176128