Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq689 349 8e-94 >seq689 Length=5479 Score = 349 bits (386), Expect = 8e-94 Identities = 317/397 (80%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||| |||| || ||||||| || Sbjct 630 AAGCACCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGTGCGAGCGTTAATCG 689 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||||||||||||||| | | |||||||| | |||||||| | |||||| | || Sbjct 690 GAATTACTGGGCGTAAAGCGAGTGTAGGTGGCTCATTAAGTCACATGTGAAATCCCCGGG 749 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGG-GCTAGAGTGCAGGAGGGGCAAGTGGAA 191 || |||| || ||||| | ||| |||| || |||||| | ||| || |||| ||| Sbjct 750 CTTAACCTGGGAACTGCATGTGATACTGGTGGTGCTAGAATATGTGAGAGGGAAGTAGAA 809 Query 192 TTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCT 251 |||| |||||||||||||||||||||| || ||||||| ||| |||||||||| ||| Sbjct 810 TTCCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGATGGCGAAGGCAGCT 869 Query 252 TGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACC 311 | |||| | | |||||||||| ||||||||||||| |||||||||||||||||||| Sbjct 870 TCCTGGCATAATATTGACACTGAGATTCGAAAGCGTGGGTAGCAAACAGGATTAGATACC 929 Query 312 CTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTG 371 ||||||||||||||||||||||||| |||||| || |||| | | || || ||| Sbjct 930 CTGGTAGTCCACGCCGTAAACGATGTCTACTAGCCGTTGGGGTCCTTGAG-ACTTTAGTG 988 Query 372 CCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||||| ||||| ||||||| || ||||||||||| Sbjct 989 GCGCAGTTAACGCGATAAGTAGACCGCCTGGGGAGTA 1025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203071594496