Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq689 307 4e-81 >seq689 Length=5479 Score = 307 bits (340), Expect = 4e-81 Identities = 381/519 (73%), Gaps = 43/519 (8%) Strand=Plus/Plus Query 2 CGAGTCCGAACAGGGCGAC-AGTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCAT 60 |||||| || |||||| | ||| || |||| ||||||||||||| ||||||||| |||| Sbjct 2918 CGAGTCTTAATAGGGCGTCTAGTTGCAGGGTATAGACCCGAAACCGAGTGATCTATCCAT 2977 Query 61 GGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAAT 120 | |||| |||| ||| |||||| | ||||| ||||||||||| |||||||| Sbjct 2978 GAGCAGGTTGAAAGTGACGTAACAGTTACCGGAGGACCGAACCCACTGTCGTTGAAAAGC 3037 Query 121 TAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTC 180 ||||||||| ||||| ||||||||||||||||| |||||| || ||||||||||||| Sbjct 3038 CAGGGGATGACTTGTGGATAGGGGTGAAAGGCTAATCAAACTCGGTGATAGCTGGTTCTC 3097 Query 181 TCCGAAAACTATTTAGGTAGTGCCTC-AAGTATCACCATCGGGGGTAGAGCACTGTTATG 239 |||||| |||||||||||| ||||| | | |||||| ||||||||||||||||| | Sbjct 3098 CCCGAAAGCTATTTAGGTAGCGCCTCGGACGAACACCATTGGGGGTAGAGCACTGTTTCG 3157 Query 240 GCTAGGGGGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGCGCATCAGTTTTA- 298 ||||||||||||| |||||||||||||| |||||||||||||| | || ||| || Sbjct 3158 GCTAGGGGGTCATCTCGACTTACCAAACCGATGCAAACTCCGAATACCGATGAGTGATAT 3217 Query 299 CCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACTA 358 ||| | || || ||| ||||||||| |||||| | ||||| || || | ||| Sbjct 3218 CCGGGAGACAGACGGC--GGGTGCTAACGTCCGTCGTCAAGAGGGAAAAAACCAAGACCG 3275 Query 359 TCAGCTAAGG----CCCCG--AAATG-------------------ACAG---------CT 384 ||||||||| || | || || |||| | Sbjct 3276 CCAGCTAAGGAATTCCTAGTTAAGTGGGAAACGATGTGGGAAGGCACAGAACAGAATTCC 3335 Query 385 AAGTTAA---ACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAG 441 |||||| ||||| || || || |||||||||||| |||||||| ||||||| Sbjct 3336 TAGTTAAGTGGGAAACGATGTGGGAAGGCACAGACAGCTAGGAGGTTGGCTTAGAAGCAG 3395 Query 442 CCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 ||| | |||||||| |||||| ||||||||||||||| Sbjct 3396 CCA-CCCTTTAAAGAAAGCGTAATAGCTCACTAGTCGAG 3433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689419685888