Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aptenodytes_20forsteri_20[refseq_20GCF_5F000699145.1_202014-06-06] 10,672 sequences; 1,254,347,440 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq689 123 5e-26 >seq689 Length=5479 Score = 123 bits (136), Expect = 5e-26 Identities = 185/260 (71%), Gaps = 16/260 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATA 60 |||||||||||||||||||||||| | | |||||||||| ||||| ||| |||| | Sbjct 2313 AGTGCACATGGTGGATGCCTTGGCAGTCAGAGGCGATGAAAGACGTGACAGCCTGCGGAA 2372 Query 61 AGCTGCGGGGAGTG------AGC--AAACACACTTTGATCCGCAGATTTCCGAATGGGGA 112 ||| |||||| | | ||| || | || ||||||| ||| || ||||||||| Sbjct 2373 AGCGGCGGGGGGGGGGGAATAGCGGCAATATCCTGTGATCCGGCGATATCTGAATGGGGA 2432 Query 113 AACCCGGCCCTTTGGGTCAT--TGCATGCTGAATACATAGGTATGCAAAGCGAACGCGGC 170 |||| | ||| ||||| || | || || | | | | || ||| || Sbjct 2433 AACC---CACTT---GTCATAAGACAGGTATCGTAAATTTATTTACGAGGCAAACCGGGA 2486 Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||| |||||||||| |||| | ||||||||| ||||| ||||||||| ||||| || Sbjct 2487 GAAGTGAAACATCTCAGTAACCCGAGGAAAAGACATCAATAGAGATTCCCCTAGTAGCGG 2546 Query 231 CGAGCGAAATGGGATGAGCC 250 |||||||| |||| ||||| Sbjct 2547 CGAGCGAACGGGGAGGAGCC 2566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918301988352