Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq194660 161 6e-38 SEQ12454 98.7 6e-19 >seq194660 Length=156 Score = 161 bits (178), Expect = 6e-38 Identities = 106/117 (91%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||||| | |||| | | |||| | ||| Sbjct 147 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGTGGGTCATTAAAAAAACACCACCC 88 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| Sbjct 87 GATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 31 >SEQ12454 Length=36659 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 2771 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 2712 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 2711 GATCGCGAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 2655 Score = 98.7 bits (108), Expect = 6e-19 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||| | |||| || || |||| ||| |||| ||||| |||| Sbjct 14290 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 14231 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | ||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 14230 GATCGCGAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 14174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 277546978920