Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq254405 324 3e-86
SEQ12454 190 4e-46
>seq254405
Length=225
Score = 324 bits (358), Expect = 3e-86
Identities = 209/226 (92%), Gaps = 2/226 (1%)
Strand=Plus/Minus
Query 86 AAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAATAATAGAATA 144
||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||
Sbjct 225 AAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATA 166
Query 145 GGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTC 204
|||||| ||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct 165 GGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAATAGGGACGGTC 106
Query 205 GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTAC 264
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 105 GGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTAC 46
Query 265 TGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310
||||||||| || ||||||| |||||||||||||| ||||||||
Sbjct 45 TGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAA 1
>SEQ12454
Length=36659
Score = 190 bits (210), Expect = 4e-46
Identities = 211/276 (76%), Gaps = 4/276 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| |||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 2374 ATGCTCTTAACTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 2433
Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
||||||||||| || |||||| ||| |||||||| ||||||||| | |||||
Sbjct 2434 TCAAAGCAGGCTGGCCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 2492
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||| | | || | |||||||| ||||| | |||||| | ||
Sbjct 2493 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 2552
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||| | |||||||||||||||||| ||||| ||||| |||||||| ||
Sbjct 2553 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACTAAAGCGAAAGCATT 2612
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||||| |||||||||||||||| ||||||||||
Sbjct 2613 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 2647
Score = 190 bits (210), Expect = 4e-46
Identities = 211/276 (76%), Gaps = 4/276 (1%)
Strand=Plus/Plus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| |||| |||| ||| || ||| | | | ||||||||||||||||||||||||
Sbjct 13893 ATGCTCTTAACTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 13952
Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
||||||||||| || |||||| ||| |||||||| ||||||||| | |||||
Sbjct 13953 TCAAAGCAGGCTGGCCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 14011
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||| | | || | |||||||| ||||| | |||||| | ||
Sbjct 14012 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 14071
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||| | |||||||||||||||||| ||||| ||||| |||||||| ||
Sbjct 14072 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACTAAAGCGAAAGCATT 14131
Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312
||||| |||||||||||||||| ||||||||||
Sbjct 14132 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 14166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 912208870144
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |