Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq254405 324 3e-86 SEQ12454 190 4e-46 >seq254405 Length=225 Score = 324 bits (358), Expect = 3e-86 Identities = 209/226 (92%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 86 AAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATACATTAGCATGGAATAATAGAATA 144 ||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||||| Sbjct 225 AAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATA 166 Query 145 GGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTC 204 |||||| ||||||||||||||||||||||||||| |||||||||||||||||| ||| Sbjct 165 GGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCATCGTAATGATTAATAGGGACGGTC 106 Query 205 GGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTAC 264 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 105 GGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTAC 46 Query 265 TGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAA 310 ||||||||| || ||||||| |||||||||||||| |||||||| Sbjct 45 TGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA-AGAACGAAA 1 >SEQ12454 Length=36659 Score = 190 bits (210), Expect = 4e-46 Identities = 211/276 (76%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 2374 ATGCTCTTAACTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 2433 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||||| || |||||| ||| |||||||| ||||||||| | ||||| Sbjct 2434 TCAAAGCAGGCTGGCCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 2492 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | || | |||||||| ||||| | |||||| | || Sbjct 2493 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 2552 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| ||||| |||||||| || Sbjct 2553 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACTAAAGCGAAAGCATT 2612 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 2613 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 2647 Score = 190 bits (210), Expect = 4e-46 Identities = 211/276 (76%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| |||| |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 13893 ATGCTCTTAACTGAGTGTCCCGCGGGGCCCGAAGCGTTTACTTTGAAAAAATTAGAGTGT 13952 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||||| || |||||| ||| |||||||| ||||||||| | ||||| Sbjct 13953 TCAAAGCAGGCTGGCCGCCGGAATACTCCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 14011 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | || | |||||||| ||||| | |||||| | || Sbjct 14012 CTATTTTGTTGGTTTTCGGAAACGGGGCCATGATTAAGAGGGACGGCCGGGGGCATTCGT 14071 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| ||||| |||||||| || Sbjct 14072 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACTAAAGCGAAAGCATT 14131 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 ||||| |||||||||||||||| |||||||||| Sbjct 14132 TGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 14166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 912208870144