Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq286261 244 4e-62 seq7729 127 8e-27 seq7812 109 2e-21 seq408 96.9 1e-17 seq122150 93.3 2e-16 >seq286261 Length=322 Score = 244 bits (270), Expect = 4e-62 Identities = 161/178 (90%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 275 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 216 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 215 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 156 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGC 200 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || Sbjct 155 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGC 98 >seq7729 Length=3744 Score = 127 bits (140), Expect = 8e-27 Identities = 98/115 (85%), Gaps = 1/115 (1%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 482 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 423 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || |||||| ||| |||||||||| ||||| | ||||||| || |||| Sbjct 422 GGTCCGAAGCGGTCCTGATGTGCAAATCGGTCGTCTGACATGGGTAT-GGAGCGA 369 Score = 75.2 bits (82), Expect = 5e-11 Identities = 64/79 (81%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||| | | | ||| || |||||||||| ||||| Sbjct 348 GAAGCCAGAGGAAACTCTGGTGGAGGTTGGTATTGGTCGTGATGTGCAAATCGGTCGTCC 289 Query 665 AATTTGGGTATAGGGGCGA 683 || ||||||||||||| Sbjct 288 AACCCAGGTATAGGGGCGA 270 >seq7812 Length=1323 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 ||||| |||||||||||||||||||||| || ||||||||||||||| |||||||| Sbjct 138 GGACCTGAAAGATGGTGAACTATGCCTGGGCAGAACGAAGCCAGAGGAAACGCTGGTGGA 197 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || || ||| ||| ||||||||| ||||| || |||| | |||||||| Sbjct 198 GGTCCGTAGTGGTCCTGATGTGCAAATCAGTCGTCCAACCTGGGCAGAGGGGCGA 252 >seq408 Length=76572 Score = 96.9 bits (106), Expect = 1e-17 Identities = 107/143 (75%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||| | | || || |||||| | | ||||| ||||||| Sbjct 64043 GAGTCGGGTTGCTTGGGAATGCAACCCAAAGCAGGTGGTAAACTCCATCTAAGGCTAAAT 63984 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||| |||| ||||||| | | ||||| ||||||| |||||| | Sbjct 63983 ACCGGCACGAGACCAATAGTCAACAAGTACTGGAAGGGAAAGTTGAAAAGAACTTTGAAG 63924 Query 160 AGAGAGTTAAAAAGCACGTGAAA 182 |||||| | || || ||||||| Sbjct 63923 AGAGAGATCAAGAGGGCGTGAAA 63901 >seq122150 Length=119 Score = 93.3 bits (102), Expect = 2e-16 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639 ||||||||||||||||| || ||||||||||||||| |||||||||| || || | Sbjct 1 ATGGTGAACTATGCCTGGGCAGAACGAAGCCAGAGGAAACGCTGGTGGAGGTCCGTAGTG 60 Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || ||| ||||||||| ||||| || |||| | |||||||| Sbjct 61 GTCCTGATGTGCAAATCAGTCGTCCAACCTGGGCAGAGGGGCGA 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2072989539400