Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 331 2e-88 SEQ30286 217 4e-54 >SEQ32532 Length=2390 Score = 331 bits (366), Expect = 2e-88 Identities = 313/397 (79%), Gaps = 2/397 (1%) Strand=Plus/Plus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 |||| |||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 592 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCG 651 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGG 134 |||||| ||||||||||||| ||| |||||||| | |||| | | ||||||| ||| || Sbjct 652 GAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGG 711 Query 135 CTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAAT 194 || |||| ||| |||| | |||| | ||| ||||| ||||| ||||||| Sbjct 712 CTCAACCGTGGAGGGTCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAAT 771 Query 195 TCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCC 254 |||| ||||||| |||||||||| ||| || ||||||||||||| |||||||||| | Sbjct 772 TCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTT 831 Query 255 CCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 314 |||| | ||||||||| ||| |||||||||||||| ||||||||||||||||||| Sbjct 832 TCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATACCC 891 Query 315 TGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTT-GGGGATTTAC-TTCCTTGGTAA 372 |||||||||||||| |||||||| ||| |||| |||| ||| | |||| || Sbjct 892 TGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGGGGTTTCCGCCCCTTAGTGC 951 Query 373 CGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | ||||||||| | ||| ||||||||||| ||| Sbjct 952 TGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTAC 988 >SEQ30286 Length=7939 Score = 217 bits (240), Expect = 4e-54 Identities = 162/187 (87%), Gaps = 2/187 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 |||| | |||| ||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 673 TACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGC 732 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||||||||||||||||||||||||||| ||||||||||| |||| ||| ||| Sbjct 733 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGT 792 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACT-GCACGACTAGAGTGTGTCAG 181 |||||||||||||| |||||||||| ||||| || ||| ||| | || |||| | || Sbjct 793 GAAATCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGGCAAG-CTTGAGTCTCGTAG 851 Query 182 AGGGGGG 188 ||||||| Sbjct 852 AGGGGGG 858 Score = 196 bits (216), Expect = 1e-47 Identities = 166/203 (82%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 208 GTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACAC 267 |||||||||||||| || |||||||| ||| |||||||||| ||||||||| || || Sbjct 1319 GTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGAC 1378 Query 268 TGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 327 ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 TGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 1438 Query 328 CCTAAACGATATCAAC-TAGTTGTTGGGGATTTACTTCCTTGGTAACGTAGCTAACGCGT 386 | |||||||| || || | | |||| | || | | | | || ||||||||||| Sbjct 1439 CGTAAACGATGTCGACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCGGAGCTAACGCGT 1498 Query 387 GAAGTTGACCGCCTGGGGAATAC 409 |||| ||||||||||||| ||| Sbjct 1499 TAAGTCGACCGCCTGGGGAGTAC 1521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1285385226112