Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value SEQ46338 109 6e-22 SEQ30286 82.4 8e-14 >SEQ46338 Length=2196 Score = 109 bits (120), Expect = 6e-22 Identities = 139/188 (74%), Gaps = 19/188 (10%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 ||||||| |||||| |||||| | ||| || |||||| | ||| ||| || || || Sbjct 1458 CGCAAACCGACACAGGTAGTCAAGATGAGAATTCTAAGGTGAGCGAGCGAACTCTCG-TT 1400 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCC---TA--------- 128 |||||||| |||||| |||||| |||||||||||| || |||| | || Sbjct 1399 AAGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTCTTTAGGGTTCACG 1340 Query 129 CCCAGAAATGGGAGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGC 188 ||||||| ||| ||||| ||||||| ||| || |||||||| |||||||||||| | Sbjct 1339 CCCAGAA----GAGC-CGCAGTGAATAGGCCCAAGCGACTGTTTATCAAAAACACAGGTC 1285 Query 189 TGTGCCAA 196 | ||| || Sbjct 1284 TCTGCTAA 1277 >SEQ30286 Length=7939 Score = 82.4 bits (90), Expect = 8e-14 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 24 CAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTAAG 83 ||||| |||||| || ||| ||| || |||| |||||||||||| ||| ||| ||| Sbjct 5080 CAAACCGACACAGGTGGTCAGGTAGAGAATACCAAGGCGCTTGAGAGAACTCGGGTGAAG 5139 Query 84 GAACTAGGCAAACTGACCCTGTAACTTCGGGATAA 118 |||||||||||| || | |||||||||||| || Sbjct 5140 GAACTAGGCAAAATGGTGCCGTAACTTCGGGAGAA 5174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529518143112