Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000599.1 Length=180 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 174 1e-41 SEQ46338 96.9 3e-18 >SEQ30286 Length=7939 Score = 174 bits (192), Expect = 1e-41 Identities = 105/111 (95%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 48 GTCGAAGATACCAGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAA 107 |||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| Sbjct 5769 GTCGAAGATACCAGCTGGCTGCAACTGTTTATTAAAAACACAGCACTGTGCAAACACGAA 5828 Query 108 AGTGGACGTATAGGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 158 |||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 5829 AGTGGACGTATACGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAATTGATG 5879 >SEQ46338 Length=2196 Score = 96.9 bits (106), Expect = 3e-18 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 60 AGGCCGCTGCGACTGTTTATTAAAAACACAGCACTCTGCAAACACGAAAGTGGACGTATA 119 ||||| |||||||||||| |||||||||| |||||| || || ||| || ||||| Sbjct 1318 AGGCCCAAGCGACTGTTTATCAAAAACACAGGTCTCTGCTAAACCGTAAGGTGATGTATA 1259 Query 120 GGGTGTGACGCCTGCCCGGTGCCGGAAGGTTAA 152 ||| ||||||||||||||||| |||||||||| Sbjct 1258 GGGGCTGACGCCTGCCCGGTGCTGGAAGGTTAA 1226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475290381468