Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 881 0.0 SEQ30286 508 2e-141 >SEQ32532 Length=2390 Score = 881 bits (976), Expect = 0.0 Identities = 493/496 (99%), Gaps = 0/496 (0%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 986 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 1045 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1046 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 1105 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1106 TAGAGATAGAGTTTTCCCCTTCGGGGGACAGAGTGACAGGTGGTGCATGGTTGTCGTCAG 1165 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1166 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 1225 Query 241 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAC 300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1226 CATCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGAT 1285 Query 301 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1286 GACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATAC 1345 Query 361 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1346 AAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATTG 1405 Query 421 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1406 TAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTAC 1465 Query 481 GGTGAATACGTTCCCG 496 |||||||||||||||| Sbjct 1466 GGTGAATACGTTCCCG 1481 >SEQ30286 Length=7939 Score = 508 bits (562), Expect = 2e-141 Identities = 413/497 (83%), Gaps = 3/497 (1%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 1519 TACGGCCGCAAGGTTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 1578 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| |||||||||||||||||||| ||||||||||| | || | Sbjct 1579 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCTGGTCTTGACATCCACGGAAGTTTT 1638 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAG 180 |||||| ||| | |||||||| || | | |||||||| ||||||| ||||||||| Sbjct 1639 CAGAGAT-GAGAATGTGCCTTCGGGA-ACCGTGAGACAGGTGCTGCATGGCTGTCGTCAG 1696 Query 181 CTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGC 240 ||||||| |||| |||||||||||||||||||||||||||||||||||| ||| ||||| Sbjct 1697 CTCGTGTTGTGAAATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTATCCTTTGTTGC 1756 Query 241 CATCATTAAGTT-GGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGGGA 299 || | | | ||| |||| ||| ||||||| |||| |||| ||||||||||||||| Sbjct 1757 CAGCGGTCCGGCCGGGAACTCAAAGGAGACTGCCAGTGATAAACTGGAGGAAGGTGGGGA 1816 Query 300 CGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAATA 359 |||||||| |||||||| |||||| || ||||||||||||||||||||||| ||| Sbjct 1817 TGACGTCAAGTCATCATGGCCCTTACGACCAGGGCTACACACGTGCTACAATGGCGCATA 1876 Query 360 CAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTCGGATT 419 ||||| | ||||| |||||| ||||| | | |||||||| || ||| |||||| Sbjct 1877 CAAAGAGAAGCGACCTCGCGAGAGCAAGCGGACCTCATAAAGTGCGTCGTAGTCCGGATT 1936 Query 420 GTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCATGCTA 479 | |||||||||||||||| |||||| |||||||||||||||||| |||||| |||| | Sbjct 1937 GGAGTCTGCAACTCGACTCCATGAAGTCGGAATCGCTAGTAATCGTGGATCAGAATGCCA 1996 Query 480 CGGTGAATACGTTCCCG 496 ||||||||||||||||| Sbjct 1997 CGGTGAATACGTTCCCG 2013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1499084506880