Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value SEQ46338 286 7e-75 SEQ30286 143 5e-32 >SEQ46338 Length=2196 Score = 286 bits (316), Expect = 7e-75 Identities = 244/298 (82%), Gaps = 5/298 (2%) Strand=Plus/Minus Query 44 GGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGG-ACGACGTATAA 102 |||| || || ||||||||||||| | ||| |||| ||||||||| | || || ||| Sbjct 924 GGAGGCGTTGGTGGGATACTACCCTAGCTGTGTTGGCTTTCTAACCCGCACCACTTAT-- 867 Query 103 CCGTTGACGG-GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGT 161 ||| | || ||||||||||| ||||||||||||||||||||||||||||| ||| || Sbjct 866 -CGTGGTGGGAGACAGTGTCAGGCGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGT 808 Query 162 AACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGC 221 ||||||||||| ||||| | ||||||| ||| |||||| ||| | | |||| |||||| Sbjct 807 AACGGAGGCGCTCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCATAGAGTGTAAAGGC 748 Query 222 AAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281 | ||||| | |||||||||| ||| |||||| ||||||| |||||| ||| |||| ||| Sbjct 747 ATAAGGGAGCTTGACTGCGAGACCTACAAGTCGAGCAGGGTCGAAAGACGGACTTAGTGA 688 Query 282 TCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||||| ||| | | |||||| |||| |||||| ||||||||||||||||| ||||||| Sbjct 687 TCCGGTGGTTCCGCATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCCGGGGATA 630 >SEQ30286 Length=7939 Score = 143 bits (158), Expect = 5e-32 Identities = 160/212 (75%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189 |||||||||||||||||| ||||| ||||||||||||||| || | ||| | || | | Sbjct 6645 AGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATC 6704 Query 190 TTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCA 249 ||| ||| | || | | ||||||| |||| ||| | |||||||||| | | | Sbjct 6705 CTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAG--CGTGA 6762 Query 250 AGTCT--AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307 | | |||||| |||||| || | || |||||||| ||| |||||||||| |||| Sbjct 6763 CGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCA 6822 Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 |||||| ||||||||||| ||| | ||||||| Sbjct 6823 TCGCTCAACGGATAAAAGGTACTCCGGGGATA 6854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 979189241728