Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= AAMG01001083.1
Length=339
Score E
Sequences producing significant alignments: (Bits) Value
SEQ46338 286 7e-75
SEQ30286 143 5e-32
>SEQ46338
Length=2196
Score = 286 bits (316), Expect = 7e-75
Identities = 244/298 (82%), Gaps = 5/298 (2%)
Strand=Plus/Minus
Query 44 GGAGCCGCTGTTGGGATACTACCCCTGTTGTATTGGATTTCTAACCGG-ACGACGTATAA 102
|||| || || ||||||||||||| | ||| |||| ||||||||| | || || |||
Sbjct 924 GGAGGCGTTGGTGGGATACTACCCTAGCTGTGTTGGCTTTCTAACCCGCACCACTTAT-- 867
Query 103 CCGTTGACGG-GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGT 161
||| | || ||||||||||| ||||||||||||||||||||||||||||| ||| ||
Sbjct 866 -CGTGGTGGGAGACAGTGTCAGGCGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAAGGT 808
Query 162 AACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGC 221
||||||||||| ||||| | ||||||| ||| |||||| ||| | | |||| ||||||
Sbjct 807 AACGGAGGCGCTCAAAGGTTCCCTCAGAATGGTTGGAAATCATTCATAGAGTGTAAAGGC 748
Query 222 AAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGA 281
| ||||| | |||||||||| ||| |||||| ||||||| |||||| ||| |||| |||
Sbjct 747 ATAAGGGAGCTTGACTGCGAGACCTACAAGTCGAGCAGGGTCGAAAGACGGACTTAGTGA 688
Query 282 TCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
||||| ||| | | |||||| |||| |||||| ||||||||||||||||| |||||||
Sbjct 687 TCCGGTGGTTCCGCATGGAAGGGCCATCGCTCAACGGATAAAAGCTACCCCGGGGATA 630
>SEQ30286
Length=7939
Score = 143 bits (158), Expect = 5e-32
Identities = 160/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 130 AGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGC 189
|||||||||||||||||| ||||| ||||||||||||||| || | ||| | || | |
Sbjct 6645 AGTTTGACTGGGGCGGTCTCCTCCTAAAGAGTAACGGAGGAGCACGAAGGTTGGCTAATC 6704
Query 190 TTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCA 249
||| ||| | || | | ||||||| |||| ||| | |||||||||| | | |
Sbjct 6705 CTGGTCGGACATCAGGAGGTTAGTGCAATGGCATAAGCCAGCTTGACTGCGAG--CGTGA 6762
Query 250 AGTCT--AGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCG 307
| | |||||| |||||| || | || |||||||| ||| |||||||||| ||||
Sbjct 6763 CGGCGCGAGCAGGTGCGAAAGCAGGTCATAGTGATCCGGTGGTTCTGAATGGAAGGGCCA 6822
Query 308 TCGCTCGACGGATAAAAGCTACCCTGGGGATA 339
|||||| ||||||||||| ||| | |||||||
Sbjct 6823 TCGCTCAACGGATAAAAGGTACTCCGGGGATA 6854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 979189241728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |