Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= AAMG01001178.1
Length=367
Score E
Sequences producing significant alignments: (Bits) Value
SEQ30286 313 5e-83
SEQ32532 223 7e-56
>SEQ30286
Length=7939
Score = 313 bits (346), Expect = 5e-83
Identities = 240/282 (85%), Gaps = 2/282 (1%)
Strand=Plus/Minus
Query 56 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 115
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 228
Query 116 TCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTA 175
||||||||| ||| ||||||||||||||||| || |||||||||||| |||||||| |||
Sbjct 227 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA 168
Query 176 CCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCC 235
|| |||| |||||||||||| | || ||| |||| ||| || ||||||||||||||||
Sbjct 167 CCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCC 108
Query 236 TGCTTTCTCCCGTAGGAC-GTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCAC 294
|||| | | ||| |||||||||||||| |||||||| |||||||||| |
Sbjct 107 CTCTTT-GGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTC 49
Query 295 TACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336
| ||||||| |||| || ||||||||||||||||||| |||
Sbjct 48 CATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTC 7
>SEQ32532
Length=2390
Score = 223 bits (246), Expect = 7e-56
Identities = 168/195 (86%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61
||||| |||||||||||||| | ||| |||||||| ||| || |||||||||||||||
Sbjct 526 TTTACGATCCGAAGACCTTCAT-CACTCACGCGGCGTTG-CTCCGTCAGGCTTTCGCCCA 469
Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121
||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 TTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 409
Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181
||| | ||||| |||||||| | | |||| ||||| |||||||| |||| |||||| ||
Sbjct 408 GTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTTGCCTTGGTAAGCCGTTACCTTAC 349
Query 182 CAACTAGCTAATCCG 196
|||||||||||| ||
Sbjct 348 CAACTAGCTAATGCG 334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1068496403840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |