Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 313 5e-83 SEQ32532 223 7e-56 >SEQ30286 Length=7939 Score = 313 bits (346), Expect = 5e-83 Identities = 240/282 (85%), Gaps = 2/282 (1%) Strand=Plus/Minus Query 56 CGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 115 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 228 Query 116 TCCAGTGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTA 175 ||||||||| ||| ||||||||||||||||| || |||||||||||| |||||||| ||| Sbjct 227 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA 168 Query 176 CCTCACCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCC 235 || |||| |||||||||||| | || ||| |||| ||| || |||||||||||||||| Sbjct 167 CCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCC 108 Query 236 TGCTTTCTCCCGTAGGAC-GTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCAC 294 |||| | | ||| |||||||||||||| |||||||| |||||||||| | Sbjct 107 CTCTTT-GGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTC 49 Query 295 TACCAGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 | ||||||| |||| || ||||||||||||||||||| ||| Sbjct 48 CATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTC 7 >SEQ32532 Length=2390 Score = 223 bits (246), Expect = 7e-56 Identities = 168/195 (86%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| |||||||||||||| | ||| |||||||| ||| || ||||||||||||||| Sbjct 526 TTTACGATCCGAAGACCTTCAT-CACTCACGCGGCGTTG-CTCCGTCAGGCTTTCGCCCA 469 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 468 TTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 409 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||||| |||||||| | | |||| ||||| |||||||| |||| |||||| || Sbjct 408 GTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTTGCCTTGGTAAGCCGTTACCTTAC 349 Query 182 CAACTAGCTAATCCG 196 |||||||||||| || Sbjct 348 CAACTAGCTAATGCG 334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068496403840