Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 470 4e-130 SEQ23857 203 8e-50 SEQ23856 203 8e-50 SEQ23855 203 8e-50 SEQ10228 104 6e-20 >SEQ30286 Length=7939 Score = 470 bits (520), Expect = 4e-130 Identities = 358/411 (87%), Gaps = 9/411 (2%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||||||| ||||||||| ||||||||||||||||||||||||| ||| Sbjct 3556 CCACAAGTCAT-CCGCTAA-TTTTTCAACATTAGTCGGTTCGGTCCTCCAGTTAGT-GTT 3500 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||||||| |||||||||||| || |||||| || ||||| ||||||||| ||| || Sbjct 3499 ACCCAACCTT-CAACCTGCCCAT-GGCTAGATCACCGGGTTT-CGGGTCTATA-CCCTGC 3444 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAGCTTTG 188 ||| |||||| ||||||||| ||| | || || ||||||||||||||||| ||| | Sbjct 3443 AACTTAACGCCCAGTTAAGACTCGGTTTCC-CTTCGGCTCCCCTATTCGGTTAACCTT-G 3386 Query 189 CCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGG 248 | || ||| ||||||||||||||||||||||||||||||||||||||| | | ||| | Sbjct 3385 CTACAGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACGCCTAAGCGT 3326 Query 249 GCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTC 308 |||||||||||||||||| | ||||||||||| ||| ||||||||||||| ||||||||| Sbjct 3325 GCTCCCACTGCTTGTACGTACACGGTTTCAGGTTCTTTTTCACTCCCCTCGCCGGGGTTC 3266 Query 309 TTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTG 368 |||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 3265 TTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTG 3206 Query 369 GAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||||||||||||||||||||| | | |||| ||| ||||||| Sbjct 3205 GAGGATGGTCCCCCCATATTCAGACAGGATACCACGTGTCCCGCCCTACTC 3155 >SEQ23857 Length=900 Score = 203 bits (224), Expect = 8e-50 Identities = 179/221 (81%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||| |||| | |||| ||||||||| |||| ||||||| || | ||||| ||| Sbjct 676 TAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCATAAACG--GGCTCTGACTA 619 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||| ||| ||||||||| | ||| |||||||||||| |||||||| |||||| |||| Sbjct 618 CTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCT-TCCGGGGTACTTTTCACCTT 560 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| ||||||||||||||| | ||||||||||||| | ||||||| Sbjct 559 TCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTAGGAGATGGTC 500 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | |||| |||| ||| | |||| ||||||||||| ||||| Sbjct 499 CTCCCAGATTCCGACGGAATTTCACGTGCTCCGTCGTACTC 459 Score = 107 bits (118), Expect = 5e-21 Identities = 130/171 (76%), Gaps = 7/171 (4%) Strand=Plus/Minus Query 138 CCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGT--TAAGCTTTGCCACTGA 195 ||||| | ||||||||||| ||||||| |||| | ||||| | | | | |||| | || Sbjct 900 CCCTATTCAGACTCGCTTT-CGCTACGGCTCCAC-ATTCGCTGCTTAACCTTGCATCAGA 843 Query 196 AAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCA 255 ||| |||| | |||| ||||||||| |||| ||||||| || | ||||| | Sbjct 842 TCGTAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCATAAACG--GGCTCTGA 785 Query 256 CTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 || |||||| ||| ||||||||| | ||| |||||||||||| |||||||| Sbjct 784 CTACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCT-TCCGGGGT 735 >SEQ23856 Length=1343 Score = 203 bits (224), Expect = 8e-50 Identities = 179/221 (81%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||| |||| | |||| ||||||||| |||| ||||||| || | ||||| ||| Sbjct 668 TAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCATAAACG--GGCTCTGACTA 725 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||| ||| ||||||||| | ||| |||||||||||| |||||||| |||||| |||| Sbjct 726 CTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCT-TCCGGGGTACTTTTCACCTT 784 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| ||||||||||||||| | ||||||||||||| | ||||||| Sbjct 785 TCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTAGGAGATGGTC 844 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | |||| |||| ||| | |||| ||||||||||| ||||| Sbjct 845 CTCCCAGATTCCGACGGAATTTCACGTGCTCCGTCGTACTC 885 Score = 100 bits (110), Expect = 7e-19 Identities = 127/170 (75%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 138 CCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT-CGGTTAAGCTTTGCCACTGAA 196 ||||| | ||||||||||| |||| || |||| | || | | | | | |||| | || Sbjct 1 CCCTATTCAGACTCGCTTT-CGCTGCGGCTCCACATTTGCTGCTTAACCTTGCATCAGAT 59 Query 197 AATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCAC 256 ||| |||| | |||| ||||||||| |||| ||||||| || | ||||| || Sbjct 60 CGTAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCATTAACG--GGCTCTGAC 117 Query 257 TGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 | |||||| ||| ||||||||| | ||| |||||||||||| |||||||| Sbjct 118 TACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCT-TCCGGGGT 166 >SEQ23855 Length=1343 Score = 203 bits (224), Expect = 8e-50 Identities = 179/221 (81%), Gaps = 3/221 (1%) Strand=Plus/Plus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||| |||| | |||| ||||||||| |||| ||||||| || | ||||| ||| Sbjct 668 TAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCATAAACG--GGCTCTGACTA 725 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||| ||| ||||||||| | ||| |||||||||||| |||||||| |||||| |||| Sbjct 726 CTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCT-TCCGGGGTACTTTTCACCTT 784 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| ||||||||||||||| | ||||||||||||| | ||||||| Sbjct 785 TCCCTCACGGTACTGGTTCACTATCGGTCACTAGAGAGTATTTAGCCTTAGGAGATGGTC 844 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | |||| |||| ||| | |||| ||||||||||| ||||| Sbjct 845 CTCCCAGATTCCGACGGAATTTCACGTGCTCCGTCGTACTC 885 Score = 100 bits (110), Expect = 7e-19 Identities = 127/170 (75%), Gaps = 5/170 (3%) Strand=Plus/Plus Query 138 CCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATT-CGGTTAAGCTTTGCCACTGAA 196 ||||| | ||||||||||| |||| || |||| | || | | | | | |||| | || Sbjct 1 CCCTATTCAGACTCGCTTT-CGCTGCGGCTCCACATTTGCTGCTTAACCTTGCATCAGAT 59 Query 197 AATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCAC 256 ||| |||| | |||| ||||||||| |||| ||||||| || | ||||| || Sbjct 60 CGTAACTCGCCGGTTCATTCTACAAAAGGCACGCCATCACCCATTAACG--GGCTCTGAC 117 Query 257 TGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 | |||||| ||| ||||||||| | ||| |||||||||||| |||||||| Sbjct 118 TACTTGTAAGCACACGGTTTCAAGTTCTCTTTCACTCCCCT-TCCGGGGT 166 >SEQ10228 Length=1115 Score = 104 bits (114), Expect = 6e-20 Identities = 121/153 (79%), Gaps = 8/153 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 || ||| |||| ||||| |||||| ||||| |||||||||||||||||| | ||| ||| Sbjct 971 CCTCAGTTCAT-CCGCTCACTTTT-CAACGTAAGTCGGTTCGGTCCTCCATTCAGT-GTT 1027 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| | | ||||||||| ||| ||| |||||| || || ||||||||||| ||| Sbjct 1028 ACCTGAAC-TTCAACCTGACCA-AGGGTAGATCACCTGG-TTTCGGGTCTA-CGACCAAA 1083 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCT 161 ||| |||||||| | |||||||| ||||||| Sbjct 1084 TACTCAACGCCCTATTCAGACTCGC-TTTCGCT 1115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1237542103552