Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 212 1e-52 SEQ30286 161 2e-37 >SEQ32532 Length=2390 Score = 212 bits (234), Expect = 1e-52 Identities = 236/313 (75%), Gaps = 8/313 (3%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||| | ||||| |||| ||||||| | || || ||| ||||||||||||||||| Sbjct 495 GGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTCCCGTAG 436 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| |||||||| ||| |||||||| ||||||| || Sbjct 435 GAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCTACGCAT 376 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||| | |||||| || ||| || |||||||| ||||| | |||| |||||| | | Sbjct 375 CGTTGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATGCGGCGCGGATCCATCTATAA 316 Query 181 GCGATA--AA-----TCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATT 233 | || | || ||||| | ||| |||| | | | | ||||| ||||||| Sbjct 315 GTGACAGCAAAACCGTCTTTCACTATTGAACCATGCGGTTCAAT-ATATTATCCGGTATT 257 Query 234 AGCGTTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACC 293 ||| |||||| | ||||| ||| ||| | ||| ||||| ||||||||||||||| Sbjct 256 AGCTCCGGTTTCCCGAAGTTATCCCAGTCTTATAGGTAGGTTATCCACGTGTTACTCACC 197 Query 294 CGTCCGCCACTAA 306 |||||||| |||| Sbjct 196 CGTCCGCCGCTAA 184 >SEQ30286 Length=7939 Score = 161 bits (178), Expect = 2e-37 Identities = 210/288 (73%), Gaps = 17/288 (6%) Strand=Plus/Minus Query 24 CCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCC 83 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | Sbjct 285 CCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTC 226 Query 84 CAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGCTTGGTGGGCTATTATC 143 || |||||| | ||| |||||||| || |||| |||||||| || |||| || ||| | Sbjct 225 CAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTACC 166 Query 144 TCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCAGCGATAAATCTTTGGTCAAAGAA 203 |||| |||| |||||| | || |||| || | | || | ||| Sbjct 165 CCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGA-------GGCC--CGAA 115 Query 204 TGATGCCATC----CTCT---GACATTATGCGGTATTAGCGTTCGTTTCCAAACGTTATT 256 | || || ||| ||||||||||||||||||| |||||||| ||||| Sbjct 114 GGTCCCCCTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATC 55 Query 257 CCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGCCACT 304 || ||| ||||| ||| | || |||||||||||||||||||| Sbjct 54 CCCCTCCATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACT 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 995136949248