Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq254405 116 4e-24
SEQ12454 104 3e-20
>seq254405
Length=225
Score = 116 bits (128), Expect = 4e-24
Identities = 81/91 (89%), Gaps = 1/91 (1%)
Strand=Plus/Plus
Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65
||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||
Sbjct 135 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 194
Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTT 95
|| || |||||||||||||||||||||||
Sbjct 195 AGCAATACGCCTGCTTTGAACACTCTAATTT 225
>SEQ12454
Length=36659
Score = 104 bits (114), Expect = 3e-20
Identities = 145/193 (75%), Gaps = 8/193 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| |||||| ||||
Sbjct 2507 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 2449
Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127
||||||||||||||||||||||||| |||| ||||| | | | || || | | |||
Sbjct 2448 GCCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 2389
Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| ||| | || |||| | |||||||| | || ||| |||||
Sbjct 2388 CTCAGTTAAGAGCATCGAGGGGGCGCCGAGAGACAGGGGCTGGGACAGGCGGTAGCTCGC 2329
Query 183 CGTGAGGCGGACC 195
| | ||||||||
Sbjct 2328 CTCGCGGCGGACC 2316
Score = 104 bits (114), Expect = 3e-20
Identities = 145/193 (75%), Gaps = 8/193 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || | ||||||||| |||||||| ||| |||||| ||||
Sbjct 14026 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 13968
Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127
||||||||||||||||||||||||| |||| ||||| | | | || || | | |||
Sbjct 13967 GCCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 13908
Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182
| || | ||| |||| ||| | || |||| | |||||||| | || ||| |||||
Sbjct 13907 CTCAGTTAAGAGCATCGAGGGGGCGCCGAGAGACAGGGGCTGGGACAGGCGGTAGCTCGC 13848
Query 183 CGTGAGGCGGACC 195
| | ||||||||
Sbjct 13847 CTCGCGGCGGACC 13835
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593315509752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |