Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq254405 116 4e-24 SEQ12454 104 3e-20 >seq254405 Length=225 Score = 116 bits (128), Expect = 4e-24 Identities = 81/91 (89%), Gaps = 1/91 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||| Sbjct 135 CTAGAAACCAACAAAATAGAACCAAACGTCCTATTCTATTATTCCATGCTAATATATTCG 194 Query 66 GGC-GTAAGCCTGCTTTGAACACTCTAATTT 95 || || ||||||||||||||||||||||| Sbjct 195 AGCAATACGCCTGCTTTGAACACTCTAATTT 225 >SEQ12454 Length=36659 Score = 104 bits (114), Expect = 3e-20 Identities = 145/193 (75%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 2507 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 2449 Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127 ||||||||||||||||||||||||| |||| ||||| | | | || || | | ||| Sbjct 2448 GCCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 2389 Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182 | || | ||| |||| ||| | || |||| | |||||||| | || ||| ||||| Sbjct 2388 CTCAGTTAAGAGCATCGAGGGGGCGCCGAGAGACAGGGGCTGGGACAGGCGGTAGCTCGC 2329 Query 183 CGTGAGGCGGACC 195 | | |||||||| Sbjct 2328 CTCGCGGCGGACC 2316 Score = 104 bits (114), Expect = 3e-20 Identities = 145/193 (75%), Gaps = 8/193 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || | ||||||||| |||||||| ||| |||||| |||| Sbjct 14026 AAACCAACAAAATAGAACCGGA-GTCCTATTCCATTATTCCTAGCTGGAGTATTCCGGCG 13968 Query 70 TA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCACA 127 ||||||||||||||||||||||||| |||| ||||| | | | || || | | ||| Sbjct 13967 GCCAGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGACA 13908 Query 128 C-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGTA-CTCGC 182 | || | ||| |||| ||| | || |||| | |||||||| | || ||| ||||| Sbjct 13907 CTCAGTTAAGAGCATCGAGGGGGCGCCGAGAGACAGGGGCTGGGACAGGCGGTAGCTCGC 13848 Query 183 CGTGAGGCGGACC 195 | | |||||||| Sbjct 13847 CTCGCGGCGGACC 13835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593315509752