Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 170 4e-40 SEQ10228 150 4e-34 SEQ46338 127 5e-27 >SEQ30286 Length=7939 Score = 170 bits (188), Expect = 4e-40 Identities = 179/235 (76%), Gaps = 8/235 (3%) Strand=Plus/Minus Query 171 CTGACACGACGCTCCCCTACCCAACCACACAG-------GTTGCCACAGCTTCGGCGGAT 223 || ||| ||||||||||||||||| || || | |||| ||||||||| | || Sbjct 3991 CTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCAT 3932 Query 224 AACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACT 283 ||| |||||| ||||| || |||| | ||| ||||||||||||||||||| | Sbjct 3931 GGTTTA-GCCCCGTTACATCTTCCGCGCAGGCCGACTCGACCAGTGAGCTATTACGCTTT 3873 Query 284 CTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT 343 |||| || |||||||||||| |||||||| |||||| ||||| || ||||||| || Sbjct 3872 CTTTAAATGATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTGGGCCTTCCCACATCGTT 3813 Query 344 TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||||||| | || |||| ||| ||||||||| | |||||| ||||||||||| Sbjct 3812 TCCCACTTAACCATGACTTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 3758 >SEQ10228 Length=1115 Score = 150 bits (166), Expect = 4e-34 Identities = 117/138 (85%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 |||||||||||| ||| || ||||||| |||||| ||||||| | ||||| ||| | Sbjct 10 CCACAGCTTCGGTA-ATATGTTTAGCCCCGGTACATTTTCGGCGCAGTGTCACTCGACTA 68 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 ||||||||||||||||||||| || |||||||||||| |||||||| |||| ||||||| Sbjct 69 GTGAGCTATTACGCACTCTTTAAATGATGGCTGCTTCTAAGCCAACATCCTAGTTGTCTG 128 Query 327 CGCAACTCCACATCCTTT 344 ||||| ||||||||||| Sbjct 129 GGCAACGCCACATCCTTT 146 >SEQ46338 Length=2196 Score = 127 bits (140), Expect = 5e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || ||||||||||||||||| |||||||||||||| |||||| || ||| | | | | Sbjct 1692 CGCCTACGCCTGTCGGCCTCAGCTTAGGACCCGACTAACCCAGAGCGGACGAGCCTTCCT 1751 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 |||||| |||| | |||||| ||||||||||| |||||||| ||||||||| || | Sbjct 1752 CTGGAAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGG 1811 Query 121 CATTCTCACT 130 |||||||||| Sbjct 1812 CATTCTCACT 1821 Score = 127 bits (140), Expect = 5e-27 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || ||||||||||||||||| |||||||||||||| |||||| || ||| | | | | Sbjct 1976 CGCCTACGCCTGTCGGCCTCAGCTTAGGACCCGACTAACCCAGAGCGGACGAGCCTTCCT 2035 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACACGCTACTCATGCCTG 120 |||||| |||| | |||||| ||||||||||| |||||||| ||||||||| || | Sbjct 2036 CTGGAAACCTTAGTCAATCGGTGGACGGGATTCTCACCCGTCTTTCGCTACTCACACCGG 2095 Query 121 CATTCTCACT 130 |||||||||| Sbjct 2096 CATTCTCACT 2105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1173751273472