Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 293 4e-77 SEQ30286 127 3e-27 >SEQ32532 Length=2390 Score = 293 bits (324), Expect = 4e-77 Identities = 234/279 (84%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| | |||||||||||||| | |||| || |||||||||||||||||| Sbjct 869 CCCACGCTTTCGCACATCAGCGTCAGTTACAGACCAGAAAGTCGCCTTCGCCACTGGTGT 810 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||| ||| ||||||||||||||||||| |||||||| || ||||| | |||| Sbjct 809 TCCTCCATATCTCTGCGCATTTCACCGCTACACATGGAATTCCACTTTCCTCTTCTGCAC 750 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATG-GGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||||| |||| | || ||||||||| | ||||||||| ||| Sbjct 749 TCAAGTTTTCCAGTTTCCAATG-ACCCTCCACGGTTGAGCCGTGGGCTTTCACATCAGAC 691 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || |||||||| ||| |||||| |||||||| ||||||||||||||||||||||| Sbjct 690 TTAAAAAACCGCCTACGCGCGCTTTACGCCCAATAATTCCGGATAACGCTTGCCACCTAC 631 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||||||||||||||||||| Sbjct 630 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 592 >SEQ30286 Length=7939 Score = 127 bits (140), Expect = 3e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 131 CAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCG 190 |||| ||| |||||| |||||||||| | ||||||||||||||| | ||| Sbjct 832 CAGTATCAGATGCAGTTCCCAGGTTGAGCCCGGGGATTTCACATCTGACTTAACAAACCG 773 Query 191 CCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACCGCG 250 ||| | || |||||| |||| ||| |||| |||||||||| ||| |||||||||||| Sbjct 772 CCTGCGTGCGCTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTATTACCGCG 713 Query 251 GCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||| ||||||||| |||| ||| | |||| Sbjct 712 GCTGCTGGCACGGAGTTAGCCGGTGCTTCTTCTGCGGGTA 673 Score = 86.0 bits (94), Expect = 1e-14 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||| ||||||||| |||||| ||||||||||||| ||| | Sbjct 1403 CCCACGCTTTCGCACCTGAGCGTCAGTCTTCGTCCAGGGGGCCGCCTTCGCCACCGGTAT 1344 Query 61 TCCTCCGTATATCTACGCATTTCAC 85 |||||| || |||||||||||||| Sbjct 1343 TCCTCCAGATCTCTACGCATTTCAC 1319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 826175897988