Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001851.1 Length=140 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 152 4e-35 SEQ46338 116 3e-24 >SEQ30286 Length=7939 Score = 152 bits (168), Expect = 4e-35 Identities = 118/138 (86%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 6843 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTG 6784 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||||| |||||| | || | |||||| |||||| ||| ||||||||||||| Sbjct 6783 CTTTCGCACCTGCTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAA 6724 Query 121 CACTAC-GATTTCCGACC 137 | || | ||| ||||||| Sbjct 6723 C-CTCCTGATGTCCGACC 6707 >SEQ46338 Length=2196 Score = 116 bits (128), Expect = 3e-24 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1 TACCTTTTATCCGTTGAGCGATGGCCCTTCCATTCATAGCCACCGGATCACTATGACCTG 60 || |||||||||||||||||||||||||||||| | | |||||||||||||| | || Sbjct 641 TAGCTTTTATCCGTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTAAGTCCGT 700 Query 61 CTTTCGCATCTGCTCTAGTTGTTGCTCTCGCAATCAAGCACACTTTTGCCATTGCACTAT 120 |||||| |||||| | |||| | ||||||| |||||| | ||| |||| || |||| | Sbjct 701 CTTTCGACCCTGCTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTATGCCTTTACACTCT 760 Query 121 CACTACGATTTCCGACC 137 | ||||||| ||| Sbjct 761 ATGAATGATTTCCAACC 777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350921467600