Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq254405 215 5e-54 SEQ12454 96.9 4e-18 >seq254405 Length=225 Score = 215 bits (238), Expect = 5e-54 Identities = 150/168 (89%), Gaps = 2/168 (1%) Strand=Plus/Minus Query 25 AAATTAGAGCGTTCAAAGCAGGCCT-TTGCTCGAATACATTACCATGGAATAATAGAATA 83 ||||||||| ||||||||||||| | ||||||||||| |||| ||||||||||||||||| Sbjct 225 AAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATATATTAGCATGGAATAATAGAATA 166 Query 84 GGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATACGGATAGT 143 |||||| ||||||||||||| ||||||||||||| ||||||||| |||| ||| || Sbjct 165 GGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACC-ATCGTAATGATTAATAGGGACGGT 107 Query 144 CGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTATT 191 |||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 106 CGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATT 59 >SEQ12454 Length=36659 Score = 96.9 bits (106), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGG 71 ||||||||||||||||||||| ||||||||||||| || |||||| | | || Sbjct 2410 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGCCGCCGGAATACTCCAGCTAGG 2469 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 2470 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 2527 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 2528 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 2581 Score = 96.9 bits (106), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATACATTACCATGG 71 ||||||||||||||||||||| ||||||||||||| || |||||| | | || Sbjct 13929 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTGGCCGCCGGAATACTCCAGCTAGG 13988 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 13989 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACGGGGCCATGATT 14046 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| | |||||| | ||||| | | |||||||||||||||| Sbjct 14047 AAGAGGGACGGCCGGGGGCATTCGTATTGTGCCGCTAGAGGTGAAATTCTTGGA 14100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510378933120