Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 237 1e-60 SEQ46338 111 1e-22 >SEQ30286 Length=7939 Score = 237 bits (262), Expect = 1e-60 Identities = 146/156 (94%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6831 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 6772 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 |||| |||||||| ||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 6771 CTCGCGCCGTCACGCTCGCAGTCAAGCTGGCTTATGCCATTGCACTAACCTCCTGATGTC 6712 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||| ||||||| |||||||||||||||||||| Sbjct 6711 CGACCAGGATTAGCCAACCTTCGTGCTCCTCCGTTA 6676 >SEQ46338 Length=2196 Score = 111 bits (122), Expect = 1e-22 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| | ||||||||||||||||| | || |||||| |||| Sbjct 653 GTTGAGCGATGGCCCTTCCATGCGGAACCACCGGATCACTAAGTCCGTCTTTCGACCCTG 712 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| || |||||||||||||| |||||||| || |||| | ||| || Sbjct 713 CTCGACTTGTAGGTCTCGCAGTCAAGCTCCCTTATGCCTTTACACTCTATGAATGATTTC 772 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 773 CAACCATTCTGAGGGAACCTTTGAGCGCCTCCGTTA 808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472100513136