Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value SEQ46338 396 4e-108 SEQ30286 262 6e-68 >SEQ46338 Length=2196 Score = 396 bits (438), Expect = 4e-108 Identities = 252/274 (92%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61 |||| ||||||| |||||||||| |||||| |||||||| |||| || ||||| ||||| Sbjct 306 GAGGGGGGCTTCATGCTTAGATGCTTTCAGCACTTATCCCGTCCATACATAGCTACCCAG 365 Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121 |||||| |||||| ||||||||| |||||||||| ||||||||||||||||||||||| Sbjct 366 CTATGCCGTTGGCACGACAACTGGTACACCAGAGGTATGTCCATCCCGGTCCTCTCGTAC 425 Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 426 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCAC 485 Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct 486 GACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 545 Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||| ||||||||||||| || |||||||||||| Sbjct 546 GACTACAGCCCCAGGATGCGATGAGCCGACATCG 579 >SEQ30286 Length=7939 Score = 262 bits (290), Expect = 6e-68 Identities = 217/265 (82%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70 |||| |||||||||| |||||| |||||| ||||| | |||||| || || ||| | Sbjct 7584 TTCGTGCTTAGATGCTTTCAGCACTTATCTCTTCCGCATTTAGCTACCGGGCAGTGCCAT 7525 Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130 ||||| ||||| | |||||| | | ||||| ||||||||||||||||| | ||| Sbjct 7524 TGGCATGACAACCCGAACACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAG 7465 Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190 | || |||| | ||| |||||||| | |||||||||||||||||||| ||||||||| Sbjct 7464 CCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTA 7405 Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250 |||||||||||||| || |||||| ||||||||||| ||||||||||||||||||||| Sbjct 7404 AACCCAGCTCGCGTACCACTTTAAATGGCGAACAGCCATACCCTTGGGACCTACTTCAGC 7345 Query 251 CCCAGGATGAGACGAGCCGACATCG 275 ||||||||| || |||||||||||| Sbjct 7344 CCCAGGATGTGATGAGCCGACATCG 7320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 778327873008