Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
SEQ30286 464 2e-128
SEQ32532 253 5e-65
SEQ26488 104 6e-20
>SEQ30286
Length=7939
Score = 464 bits (514), Expect = 2e-128
Identities = 275/287 (96%), Gaps = 0/287 (0%)
Strand=Plus/Minus
Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 228
Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 227 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA 168
Query 177 CCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCC 236
|||| || |||||||||||||||||||| |||||||| | ||||||||||||||||||
Sbjct 167 CCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCC 108
Query 237 CTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCC 296
||||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||||
Sbjct 107 CTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCC 48
Query 297 ATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGC 343
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 47 ATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGC 1
Score = 78.8 bits (86), Expect = 2e-12
Identities = 43/43 (100%), Gaps = 0/43 (0%)
Strand=Plus/Minus
Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGC 43
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 623 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGC 581
>SEQ32532
Length=2390
Score = 253 bits (280), Expect = 5e-65
Identities = 314/423 (74%), Gaps = 19/423 (4%)
Strand=Plus/Minus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
||||| | |||||| ||||| ||| |||||||| | ||| | |||||||| ||||||||
Sbjct 526 TTTACGATCCGAAGACCTTCATCACTCACGCGGCGTTGCTCCGTCAGGCTTTCGCCCATT 467
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
| | || |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 466 GCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 407
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||| | ||| |||||||| | |||| | ||||| |||| ||| ||| ||||| |||
Sbjct 406 GGCCGATCACCCTCTCAGGTCGGCTACGCATCGTTGCCTTGGTAAGCCGTTACCTTACCA 347
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTC--CCCCTCTTT 242
|||||||||| | || | |||| ||||| | || | ||| | || ||
Sbjct 346 ACTAGCTAATGCGGCGCGGATCCATCTATAAGTGACA-GCAAAACCGTCTTTCACTATTG 288
Query 243 GGTCTTGCG-------ACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTC 295
| |||| | |||| |||||||||| | |||||| | |||||||| ||
Sbjct 287 AACCATGCGGTTCAATATATTATCCGGTATTAGCTCCGGTTTCCCGAAGTTATCCCAGTC 228
Query 296 CATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACT--CGTCAGCGAAGCAGCA 352
||| | ||| ||| ||||||||||||||||| || |||||| || ||||
Sbjct 227 TTATAGGTAGGTTATCCACGTGTTACTCACCCGTCCGCCGCTAACGTCAG---AGGAGCA 171
Query 353 AGCTGCT-TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCT 411
|||| || ||||| || ||||||||||||| |||||| |||||||||||||| ||
Sbjct 170 AGCTCCTCGTCTGTT--CGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCATCCT 113
Query 412 GAG 414
|||
Sbjct 112 GAG 110
>SEQ26488
Length=503
Score = 104 bits (114), Expect = 6e-20
Identities = 57/57 (100%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 503 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1218404854528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |