Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value SEQ30286 464 2e-128 SEQ32532 253 5e-65 SEQ26488 104 6e-20 >SEQ30286 Length=7939 Score = 464 bits (514), Expect = 2e-128 Identities = 275/287 (96%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 57 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 287 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 228 Query 117 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTA 176 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 227 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA 168 Query 177 CCCCGCCAACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCC 236 |||| || |||||||||||||||||||| |||||||| | |||||||||||||||||| Sbjct 167 CCCCACCTACTAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAAGGTCCCC 108 Query 237 CTCTTTGGTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCC 296 ||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||| Sbjct 107 CTCTTTGGTCTTGCGACATTATGCGGTATTAGCTACCGTTTCCAGTAGTTATCCCCCTCC 48 Query 297 ATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGC 343 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 47 ATCAGGCAGTTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGC 1 Score = 78.8 bits (86), Expect = 2e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 1 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGC 43 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 623 GTACTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGC 581 >SEQ32532 Length=2390 Score = 253 bits (280), Expect = 5e-65 Identities = 314/423 (74%), Gaps = 19/423 (4%) Strand=Plus/Minus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||| | |||||| ||||| ||| |||||||| | ||| | |||||||| |||||||| Sbjct 526 TTTACGATCCGAAGACCTTCATCACTCACGCGGCGTTGCTCCGTCAGGCTTTCGCCCATT 467 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 466 GCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 407 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||| |||||||| | |||| | ||||| |||| ||| ||| ||||| ||| Sbjct 406 GGCCGATCACCCTCTCAGGTCGGCTACGCATCGTTGCCTTGGTAAGCCGTTACCTTACCA 347 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTC--CCCCTCTTT 242 |||||||||| | || | |||| ||||| | || | ||| | || || Sbjct 346 ACTAGCTAATGCGGCGCGGATCCATCTATAAGTGACA-GCAAAACCGTCTTTCACTATTG 288 Query 243 GGTCTTGCG-------ACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTC 295 | |||| | |||| |||||||||| | |||||| | |||||||| || Sbjct 287 AACCATGCGGTTCAATATATTATCCGGTATTAGCTCCGGTTTCCCGAAGTTATCCCAGTC 228 Query 296 CATCAGGCA-GTTTCCCAGACATTACTCACCCGTCCGCCACT--CGTCAGCGAAGCAGCA 352 ||| | ||| ||| ||||||||||||||||| || |||||| || |||| Sbjct 227 TTATAGGTAGGTTATCCACGTGTTACTCACCCGTCCGCCGCTAACGTCAG---AGGAGCA 171 Query 353 AGCTGCT-TCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCT 411 |||| || ||||| || ||||||||||||| |||||| |||||||||||||| || Sbjct 170 AGCTCCTCGTCTGTT--CGCTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCATCCT 113 Query 412 GAG 414 ||| Sbjct 112 GAG 110 >SEQ26488 Length=503 Score = 104 bits (114), Expect = 6e-20 Identities = 57/57 (100%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 358 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 503 CTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1218404854528