Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 428 1e-117 SEQ30286 181 3e-43 >SEQ32532 Length=2390 Score = 428 bits (474), Expect = 1e-117 Identities = 401/510 (79%), Gaps = 34/510 (7%) Strand=Plus/Plus Query 23 AGCGGCGGACGGGTGAGTAACGCGTGGGTAACCTGCCCTGTACACACGGATAACATACCG 82 ||||||||||||||||||||| ||||| |||||| || | || ||||||| | | Sbjct 186 AGCGGCGGACGGGTGAGTAACACGTGGATAACCTACCTATAAGACTGGGATAACTTCGGG 245 Query 83 AAAGGTATGCTAATACGAGATAATATACTTTTATCGCATGGTAGAAGTATCAAAGC---T 139 ||| |||||||| ||||||||| || | |||||||| || | |||| | Sbjct 246 AAACCGGAGCTAATACCGGATAATATA-TTGAACCGCATGGTTCAATAGTGAAAGACGGT 304 Query 140 CCGGCGGT-ACAG---GATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTA 195 || || || ||| || ||||| | |||||||||||||||||||||||||||| Sbjct 305 TTTGCTGTCACTTATAGATGGATCCGCGCCGCATTAGCTAGTTGGTAAGGTAACGGCTTA 364 Query 196 CCAAGGCGACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACAC 255 ||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct 365 CCAAGGCAACGATGCGTAGCCGACCTGAGAGGGTGATCGGCCACACTGGAACTGAGACAC 424 Query 256 GGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGAT 315 |||||| ||||||||||||||||||||| |||||| || | |||||||| ||||||||| Sbjct 425 GGTCCAGACTCCTACGGGAGGCAGCAGTAGGGAATCTTCCGCAATGGGCGAAAGCCTGAC 484 Query 316 GCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAG 375 | |||||||||||||||| |||||||| |||||| ||||||| |||||| | | ||||| Sbjct 485 GGAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATCGTAAAACTCTGTTATTAGGGAAG 544 Query 376 A---------TAA----------------TGACGGTACTTGAGGAGGAAGCCCCGGCTAA 410 | ||| ||||||||| | | || ||||| ||||||| Sbjct 545 AACAAATGTGTAAGTAACTATGCACGTCTTGACGGTACCTAATCAGAAAGCCACGGCTAA 604 Query 411 CTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGC 470 ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| Sbjct 605 CTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTA-TTGGGC 663 Query 471 GTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 |||||| | ||||||| ||||| ||||||| Sbjct 664 GTAAAGCGCGCGTAGGCGGTTTTTTAAGTC 693 >SEQ30286 Length=7939 Score = 181 bits (200), Expect = 3e-43 Identities = 123/138 (89%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 ||||||||||| ||| |||||||||| ||| ||||||||||| |||| | ||||||| Sbjct 149 GATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAG 208 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||| | |||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 209 GATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 268 Query 287 GAATATTGCACAATGGGC 304 |||||||||||||||||| Sbjct 269 GAATATTGCACAATGGGC 286 Score = 125 bits (138), Expect = 2e-26 Identities = 101/121 (83%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 380 TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTA 439 ||||| ||| | || ||||| |||||||||| |||||||||||||||||||||||| | Sbjct 667 TGACGTTACCCGCAGAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGA 726 Query 440 GGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 ||| || ||||||| |||||||||| |||||||||| | || ||| ||||| |||||| Sbjct 727 GGGTGCAAGCGTTAATCGGAATTACT-GGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGT 785 Query 500 C 500 | Sbjct 786 C 786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1492705423872