Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 417 2e-114 SEQ30286 174 4e-41 >SEQ32532 Length=2390 Score = 417 bits (462), Expect = 2e-114 Identities = 332/399 (83%), Gaps = 0/399 (0%) Strand=Plus/Plus Query 10 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 69 || ||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||| Sbjct 589 AGAAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTAT 648 Query 70 CCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTA 129 ||||||||| ||||||||||| | ||||||| ||||| ||||||| || ||||||| | | Sbjct 649 CCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCA 708 Query 130 TGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGG 189 ||||||||| || | || ||||||| | || |||||||| || || |||||| Sbjct 709 CGGCTCAACCGTGGAGGGTCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGG 768 Query 190 AATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG 249 |||||| |||||||||||||||||| ||| || |||||||||||||||||||||||| Sbjct 769 AATTCCATGTGTAGCGGTGAAATGCGCAGAGATATGGAGGAACACCAGTGGCGAAGGCGA 828 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 ||| |||| ||||||||||| |||| | |||||||||||||| |||||||||||||||| Sbjct 829 CTTTCTGGTCTGTAACTGACGCTGATGTGCGAAAGCGTGGGGATCAAACAGGATTAGATA 888 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGG 369 |||||||||||||||||||||||||||| | ||| |||| ||| | | | | | Sbjct 889 CCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGGGGGTTTCCGCCCCTTAG 948 Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 ||| ||||| |||||| |||| | ||| ||||||||||| Sbjct 949 TGCTGCAGCTAACGCATTAAGCACTCCGCCTGGGGAGTA 987 >SEQ30286 Length=7939 Score = 174 bits (192), Expect = 4e-41 Identities = 161/203 (79%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 206 GTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAAC 265 |||||||||||||| || ||||||| ||| |||||||||||||| |||||| || Sbjct 1319 GTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCCCTGGACGAAGAC 1378 Query 266 TGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 325 |||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 TGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGC 1438 Query 326 CGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAGCAAACGCA 385 ||||||||||| ||| || | | || | | || || | | ||| ||| ||||| Sbjct 1439 CGTAAACGATGTCGACTTGGAGGTTGTGCCCTTGAG-GCGTGGCTTCCGGAGCTAACGCG 1497 Query 386 ATAAGTATTCCACCTGGGGAGTA 408 ||||| || ||||||||||| Sbjct 1498 TTAAGTCGACCGCCTGGGGAGTA 1520 Score = 158 bits (174), Expect = 3e-36 Identities = 126/152 (83%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || ||||| |||||||||| |||||||||||||||||||||||| |||| || ||||||| Sbjct 681 GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTA 740 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 |||||||||||||||||||| | || ||| ||||| |||||||||| |||||| | Sbjct 741 ATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCC 800 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTG 160 ||||||||| || ||||| | ||| |||| Sbjct 801 CGGGCTCAACCTGGGAACTGCATCTGATACTG 832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1199267605504