Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value SEQ23857 104 4e-20 SEQ23856 104 4e-20 SEQ23855 104 4e-20 >SEQ23857 Length=900 Score = 104 bits (114), Expect = 4e-20 Identities = 185/262 (71%), Gaps = 16/262 (6%) Strand=Plus/Plus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || || ||||||||||||||| | || ||| ||||||||| | || | |||| Sbjct 57 AGGGCGCACGGTGGATGCCTTGGCACTAGAAGCCGAAGAAGGACGTTACTAACGA-CGAT 115 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||| || | || | | ||||||| |||||||||||||||| ||||| | Sbjct 116 ATGCTTTGGGTAGCT-GTAAGTAAGCGTTGATCCAGAGATTTCCGAATGGGGGAACCCAG 174 Query 120 CCCT--TTGGGTCATTG------CATGCTGAATACATAGGTATGC---AAAGCGAACGCG 168 | || ||||| |||| ||||| ||||| ||| || || || || Sbjct 175 CATGAGTTATGTCATGTTATCGACATG-TGAATTCATAGC-ATGTCAGAAGGCAGACCCG 232 Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 | |||||||||||||| |||| | | ||||| ||||| || ||||||| ||||| Sbjct 233 GAGAACTGAAACATCTTAGTACCCGGAGGAAGAGAAAGAAAAATCGATTCCCTGAGTAGC 292 Query 229 GGCGAGCGAAATGGGATGAGCC 250 ||||||||||| |||| ||||| Sbjct 293 GGCGAGCGAAACGGGAAGAGCC 314 >SEQ23856 Length=1343 Score = 104 bits (114), Expect = 4e-20 Identities = 185/262 (71%), Gaps = 16/262 (6%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || || ||||||||||||||| | || ||| ||||||||| | || | |||| Sbjct 1287 AGGGCGCACGGTGGATGCCTTGGCACTAGAAGCCGAAGAAGGACGTTACTAACGA-CGAT 1229 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||| || | || | | ||||||| |||||||||||||||| ||||| | Sbjct 1228 ATGCTTTGGGTAGCT-GTAAGTAAGCGTTGATCCAGAGATTTCCGAATGGGGGAACCCAG 1170 Query 120 CCCT--TTGGGTCATTG------CATGCTGAATACATAGGTATGC---AAAGCGAACGCG 168 | || ||||| |||| ||||| ||||| ||| || || || || Sbjct 1169 CATGAGTTATGTCATGTTATCGACATG-TGAATTCATAGC-ATGTCAGAAGGCAGACCCG 1112 Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 | |||||||||||||| |||| | | ||||| ||||| || ||||||| ||||| Sbjct 1111 GAGAACTGAAACATCTTAGTACCCGGAGGAAGAGAAAGAAAAATCGATTCCCTGAGTAGC 1052 Query 229 GGCGAGCGAAATGGGATGAGCC 250 ||||||||||| |||| ||||| Sbjct 1051 GGCGAGCGAAACGGGAAGAGCC 1030 >SEQ23855 Length=1343 Score = 104 bits (114), Expect = 4e-20 Identities = 185/262 (71%), Gaps = 16/262 (6%) Strand=Plus/Minus Query 1 AGTGCACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGT-AGTAGCTTGCGAT 59 || || || ||||||||||||||| | || ||| ||||||||| | || | |||| Sbjct 1287 AGGGCGCACGGTGGATGCCTTGGCACTAGAAGCCGAAGAAGGACGTTACTAACGA-CGAT 1229 Query 60 AAGCTGCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGG 119 | ||| ||| || | || | | ||||||| |||||||||||||||| ||||| | Sbjct 1228 ATGCTTTGGGTAGCT-GTAAGTAAGCGTTGATCCAGAGATTTCCGAATGGGGGAACCCAG 1170 Query 120 CCCT--TTGGGTCATTG------CATGCTGAATACATAGGTATGC---AAAGCGAACGCG 168 | || ||||| |||| ||||| ||||| ||| || || || || Sbjct 1169 CATGAGTTATGTCATGTTATCGACATG-TGAATTCATAGC-ATGTCAGAAGGCAGACCCG 1112 Query 169 GCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGT 228 | |||||||||||||| |||| | | ||||| ||||| || ||||||| ||||| Sbjct 1111 GAGAACTGAAACATCTTAGTACCCGGAGGAAGAGAAAGAAAAATCGATTCCCTGAGTAGC 1052 Query 229 GGCGAGCGAAATGGGATGAGCC 250 ||||||||||| |||| ||||| Sbjct 1051 GGCGAGCGAAACGGGAAGAGCC 1030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915398411648