Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value SEQ32532 167 5e-39 SEQ30286 150 4e-34 >SEQ32532 Length=2390 Score = 167 bits (184), Expect = 5e-39 Identities = 211/286 (74%), Gaps = 7/286 (2%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAG-CTCCCACA-- 57 ||||||||||||| ||||||||| |||| | || |||||| |||| | || | Sbjct 620 GGCTGCTGGCACGTAGTTAGCCGTGGCTTTCTGATTAGGTACCGTCAAGACGTGCATAGT 561 Query 58 --CGTGGAAGGTT-TTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 | | | || || |||||| |||| ||| ||||| ||||| ||| |||||||| Sbjct 560 TACTTACACATTTGTTCTTCCCTAATAACAGAGTTTTACGATCCGAAGA-CCTTCATCAC 502 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 |||||| | | ||| |||| || ||| |||||| || ||||| ||||||||||| Sbjct 501 TCACGCGGCGTTGCTCCGTCAGGCTTTCGCCCATTGCGGAAGATTCCCTACTGCTGCCTC 442 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCT 234 |||||||||| |||||||||||||||||||| ||||| || | |||||||| | || Sbjct 441 CCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCCGATCACCCTCTCAGGTCGGCT 382 Query 235 ATCCATCGTAGGCTAGGTGGGCCGTTACCCCGCCTACTACCTAATG 280 | |||||| | || ||| ||||||||| || |||| |||||| Sbjct 381 ACGCATCGTTGCCTTGGTAAGCCGTTACCTTACCAACTAGCTAATG 336 >SEQ30286 Length=7939 Score = 150 bits (166), Expect = 4e-34 Identities = 116/138 (84%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct 287 CGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGT 228 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 |||| ||||| | | |||||||||| | ||| ||||| | ||||||| ||||||| Sbjct 227 TCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGAGCCGTTA 168 Query 262 CCCCGCCTACTACCTAAT 279 |||| ||||||| ||||| Sbjct 167 CCCCACCTACTAGCTAAT 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1065306862336