Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq200857 152 8e-35
seq326823 100 5e-19
seq4204 100 5e-19
seq247 100 5e-19
seq115 100 5e-19
seq3997 86.0 1e-14
seq77 80.6 4e-13
seq123263 78.8 2e-12
>seq200857
Length=161
Score = 152 bits (168), Expect = 8e-35
Identities = 103/113 (91%), Gaps = 2/113 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || |||||||||||||||||||||||| |||||| |
Sbjct 51 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 108
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 109 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 161
>seq326823
Length=23516118
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 14881578 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCACT 14881521
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 14881520 GGAGCGAGGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 14881467
>seq4204
Length=355582
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 166218 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCACT 166161
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 166160 GGAGCGAGGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 166107
>seq247
Length=7269945
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 6597977 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCACT 6598034
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 6598035 GGAGCGAGGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 6598088
>seq115
Length=1320892
Score = 100 bits (110), Expect = 5e-19
Identities = 92/114 (81%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 234371 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCACT 234314
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| |||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 234313 GGAGCGAGGCTACCATCTGTGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 234260
>seq3997
Length=4358681
Score = 86.0 bits (94), Expect = 1e-14
Identities = 89/114 (78%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| | ||||| | || | || |||| || || |
Sbjct 2467143 GTACGAGAGGAACCGCAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCACT 2467086
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114
| ||| ||||||||||| |||||||| |||| | |||||||||||||||||
Sbjct 2467085 GGAACGAGGCTACCATCTGTGGGATTATGACTGAGCACCTCTAAGTCAGAATCC 2467032
>seq77
Length=16422433
Score = 80.6 bits (88), Expect = 4e-13
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||| ||||||||||| ||||||||
Sbjct 4459239 TTGGTGTATGTGCTTGGCTGAGGAGCCACTGGAGCGAGGCTACCATCTGTGGGATTATGA 4459180
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||
Sbjct 4459179 CTGAACGCCTCTAAGTCAGAATCC 4459156
>seq123263
Length=120
Score = 78.8 bits (86), Expect = 2e-12
Identities = 91/120 (76%), Gaps = 12/120 (10%)
Strand=Plus/Plus
Query 92 TGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGA-TTCTCTCCT--GCACATCG 148
||||||||||||||||||||||||||| |||||| ||||| |||| | || ||||
Sbjct 1 TGAACGCCTCTAAGTCAGAATCCATGCTAGAACGCGGTGATTTCTTTGCTCCACACAATA 60
Query 149 TAGTCGGATACGAAT-AGGCTT--------CGGCCCCGAACCTTAGCAGGCCGGCAACGG 199
||| |||||||||| |||| | || | | ||||| |||||||| |||||||
Sbjct 61 TAGATGGATACGAATAAGGCGTCCTTGTGGCGTCGCTGAACCATAGCAGGCTAGCAACGG 120
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 816606292992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |