Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015 -06-23] 326,828 sequences; 1,595,295,449 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value SEQ12454 466 5e-129 seq408 466 5e-129 seq214011 214 5e-53 seq326827 140 1e-30 seq171935 131 5e-28 seq3667 87.8 5e-15 >SEQ12454 Length=36659 Score = 466 bits (516), Expect = 5e-129 Identities = 420/518 (81%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 2180 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 2121 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2120 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 2061 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 2060 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 2001 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||||| | |||||| | Sbjct 2000 AGGCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCC 1941 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 | || | |||||| | | | ||||| || ||||||| | || | | || Sbjct 1940 ACGGGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCCGCCGGGCGAGCCCG 1881 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATGTA 350 ||||| |||| ||| |||||| ||| | | || || ||||| | | | ||||||| Sbjct 1880 GGTTGG-TTTTGGTCTGATAAATGCACGCGTCCCCGGAGGTCGGCGCTCGTCGGCATGTA 1822 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTA-CTATCAAATAAACGAT 406 ||||||||||||||||||| |||||||| ||| | | || | | | |||| ||| || Sbjct 1821 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGGAGGGGAGCGACCAAAGGAACCAT 1762 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||||||||||||||||||||||||||||||| | | |||||||||||||| Sbjct 1761 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCACCCGTGTGTACTTAGACATGCA 1702 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| |||||||||| Sbjct 1701 TGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 1665 Score = 466 bits (516), Expect = 5e-129 Identities = 420/518 (81%), Gaps = 16/518 (3%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 13699 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 13640 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13639 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 13580 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 13579 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 13520 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||||| | |||||| | Sbjct 13519 AGGCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCC 13460 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 | || | |||||| | | | ||||| || ||||||| | || | | || Sbjct 13459 ACGGGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCCGCCGGGCGAGCCCG 13400 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATGTA 350 ||||| |||| ||| |||||| ||| | | || || ||||| | | | ||||||| Sbjct 13399 GGTTGG-TTTTGGTCTGATAAATGCACGCGTCCCCGGAGGTCGGCGCTCGTCGGCATGTA 13341 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTA-CTATCAAATAAACGAT 406 ||||||||||||||||||| |||||||| ||| | | || | | | |||| ||| || Sbjct 13340 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGGAGGGGAGCGACCAAAGGAACCAT 13281 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||||||||||||||||||||||||||||||| | | |||||||||||||| Sbjct 13280 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCACCCGTGTGTACTTAGACATGCA 13221 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| |||||||||| Sbjct 13220 TGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 13184 Score = 365 bits (404), Expect = 1e-98 Identities = 344/430 (80%), Gaps = 15/430 (3%) Strand=Plus/Minus Query 88 CGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 25382 CGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAAC 25323 Query 148 CCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGA 207 ||| |||||||||||||||| | |||||||||||| | |||||||||||||||| Sbjct 25322 CCTGATTCCCCGTTACCCGTGGTCACCATGGTAGGCACAGACAGTACCATCGAAAGTTGA 25263 Query 208 TAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTT--AAGTTA 265 ||||||||| ||| ||||| | |||||| | | || | |||||| | | | |||| Sbjct 25262 TAGGGCAGACATTCGAATGGGTCGTCGCCGCCACGGGGGCGTGCGATCGGCTCGAGGTTA 25203 Query 266 TTATGAATCACCAAGGAGCCCCGAAGGGC----GTTGGTTTTTTATCTAATAAATACACC 321 | || ||||||| | || | | || ||||| |||| ||| |||||| ||| Sbjct 25202 TCTAGAGTCACCAAAGCCGCCGGGCGAGCCCGGGTTGG-TTTTGGTCTGATAAATGCACG 25144 Query 322 CCTTCC--GAAGTCGG-GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCA 378 | | || || ||||| | | | |||||||||||||||||||||||||| |||||||| Sbjct 25143 CGTCCCCGGAGGTCGGCGCTCGTCGGCATGTATTAGCTCTAGAATTACCACAGTTATCCA 25084 Query 379 TGTA---GTAAGGTA-CTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 434 ||| | | || | | | |||| ||| |||||||||||||||||||||||||||||| Sbjct 25083 AGTAACGGGAGGGGAGCGACCAAAGGAACCATAACTGATTTAATGAGCCATTCGCAGTTT 25024 Query 435 CACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGA 494 ||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct 25023 CACTGTACCACCCGTGTGTACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG- 24965 Query 495 CTACTGGCAG 504 |||||||||| Sbjct 24964 CTACTGGCAG 24955 >seq408 Length=76572 Score = 466 bits (516), Expect = 5e-129 Identities = 420/518 (81%), Gaps = 16/518 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 |||||||||||||||||| | || | |||||| ||||||| ||||| | ||||||||| Sbjct 67216 GTACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTCGTCACTACC 67275 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 67276 TCCCCGGGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 67335 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||| Sbjct 67336 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGGTCACCATGGT 67395 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 |||| | ||||||||||||||||||||||||| ||| ||||| | |||||| | Sbjct 67396 AGGCACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCC 67455 Query 240 TCAAGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC--- 294 | || | |||||| | | | ||||| || ||||||| | || | | || Sbjct 67456 ACGGGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCCGCCGGGCGAGCCCG 67515 Query 295 -GTTGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATGTA 350 ||||| |||| ||| |||||| ||| | | || || ||||| | | | ||||||| Sbjct 67516 GGTTGG-TTTTGGTCTGATAAATGCACGCGTCCCCGGAGGTCGGCGCTCGTCGGCATGTA 67574 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTA---GTAAGGTA-CTATCAAATAAACGAT 406 ||||||||||||||||||| |||||||| ||| | | || | | | |||| ||| || Sbjct 67575 TTAGCTCTAGAATTACCACAGTTATCCAAGTAACGGGAGGGGAGCGACCAAAGGAACCAT 67634 Query 407 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCA 466 ||||||||||||||||||||||||||||||||||| | | |||||||||||||| Sbjct 67635 AACTGATTTAATGAGCCATTCGCAGTTTCACTGTACCACCCGTGTGTACTTAGACATGCA 67694 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| |||||||||| Sbjct 67695 TGGCTTAATCTTTGAGACAAGCATATG-CTACTGGCAG 67731 >seq214011 Length=172 Score = 214 bits (236), Expect = 5e-53 Identities = 154/174 (89%), Gaps = 4/174 (2%) Strand=Plus/Minus Query 194 CCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGA 253 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 172 CCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCAGCACAAGGCCATGCGA 113 Query 254 TTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATA 313 |||| |||||||||||||||| ||| ||| ||||| | | ||| |||||||||||||| Sbjct 112 TTCGAAAAGTTATTATGAATCATCAAAGAG-TCCGAA-GACATTGATTTTTTATCTAATA 55 Query 314 AATACACCCCTTCCGAA--GTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTA 365 |||||| | ||||| || |||| | |||| ||||||||||||||||||||||| Sbjct 54 AATACATCTCTTCCAAAGGGTCGAGATTTTAAGCATGTATTAGCTCTAGAATTA 1 >seq326827 Length=63182071 Score = 140 bits (154), Expect = 1e-30 Identities = 117/142 (82%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 10 CCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCCCCGTGT 68 |||| |||| ||| | |||||| ||||||| | ||||| | |||||| ||||| | || Sbjct 8041641 CCAAATACAGCACCTCGAAAGAGTCCTGTATTATTATTTTTCATCACTATCTCCCTGGGT 8041700 Query 69 CGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGC 128 |||| ||||||||||| |||||||||||||||||||||||||||| || |||||||| Sbjct 8041701 TGGGAGAGGGTAATTTGCATGCCTGCTGCCTTCCTTGGATGTGGTAGCTGTCTCTCAGGC 8041760 Query 129 TCCCTCTCCGGAATCGAACCCT 150 | ||||||| ||||| ||| || Sbjct 8041761 TTCCTCTCCAGAATCCAACTCT 8041782 >seq171935 Length=140 Score = 131 bits (144), Expect = 5e-28 Identities = 87/97 (90%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 |||||||||||||||||||||||| || | |||||||||| |||||||||||||||||| Sbjct 44 GTACTCATTCCAATTACAAGACCCGAATGGGCCCTGTATCGTTATTTATTGTCACTACCT 103 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGC 97 ||| | | ||||||||||||||||||||||||||| Sbjct 104 CCCTGAATTAGGATTGGGTAATTTGCGCGCCTGCTGC 140 >seq3667 Length=157383 Score = 87.8 bits (96), Expect = 5e-15 Identities = 109/147 (74%), Gaps = 2/147 (1%) Strand=Plus/Minus Query 33 CCTGTATCAGTATTTATT-GTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCC 91 || |||||| ||||| || ||| || | || | | | | || ||||||||||| | ||| Sbjct 124548 CCCGTATCATTATTTTTTTGTCGCTGCTTCTCTGGTTTGAGAGTGGGTAATTTGTGGGCC 124489 Query 92 TGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151 |||||||||||| |||||||||||| ||||| ||| ||||| | || |||| | Sbjct 124488 TGCTGCCTTCCTCGGATGTGGTAGCTGTTTCCGAGG-TCCCTTTTTGGGCCTGAACACCG 124430 Query 152 ATTCCCCGTTACCCGTTGATACCATGG 178 ||| | |||||| ||| | ||| ||| Sbjct 124429 ATTTCTCGTTACTCGTAGTCACCGTGG 124403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505463589888