Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Apteryx_20australis_20mantelli_20[genbank_20GCA_5F001039765.2_202015
-06-23] 326,828 sequences; 1,595,295,449 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq312388 91.5 1e-13
seq95 87.8 1e-12
seq3026 86.0 5e-12
>seq312388
Length=601
Score = 91.5 bits (100), Expect = 1e-13
Identities = 136/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Plus
Query 65681 TCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATG 65740
|| ||| ||| | |||||||||||||| |||||||| || | || || ||||||||
Sbjct 363 TCATACGGTCCTTGCTCCTTGGCAAGTTCACAGCTGGCTTCCAAAGCACCATAATAAATG 422
Query 65741 GTCTCGAAAATGCG-TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CA 65798
||||| ||||| | | | | ||| | | |||||| || ||| | || ||||| ||
Sbjct 423 GTCTCAAAAATTTGCTGGTTCAAGCGC-TGGGCCTCAGGACTTTCGAAAGG-ATACCTCA 480
Query 65799 TCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAAT 65858
||| || |||| || |||||||| || || ||||| || |||||||| || || |
Sbjct 481 TCAAGATGAAAGCATCTGCCAGACCCTGCACACCAATGCCAATGGGACGGTGGCGTCTGT 540
Query 65859 TGGAACGT 65866
|||| |||
Sbjct 541 TGGAGCGT 548
>seq95
Length=9561987
Score = 87.8 bits (96), Expect = 1e-12
Identities = 69/83 (83%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 61288 GAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTAC 61347
|| || ||||||||||| |||||||||||||||||||| ||| | || || || ||||||
Sbjct 3108573 GAAGCCCGTTGTTTCTATGGCTTCCAGATTGCCATGGAAAATATACATTCAGAAATGTAC 3108632
Query 61348 AGTGTTCTCATCGATACGTACAT 61370
||| |||| || || || |||||
Sbjct 3108633 AGTCTTCTAATTGACACATACAT 3108655
>seq3026
Length=70695
Score = 86.0 bits (94), Expect = 5e-12
Identities = 135/188 (72%), Gaps = 4/188 (2%)
Strand=Plus/Minus
Query 65681 TCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAATAAATG 65740
|| ||| ||| | ||||| |||||||| |||||||| || | || || ||||||||
Sbjct 59689 TCATACGGTCCTTGCTCCTGGGCAAGTTCACAGCTGGCTTCCAAAGCACCATAATAAATG 59630
Query 65741 GTCTCGAAAATGCG-TCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATACC-CA 65798
||||| ||||| | | | | ||| | | |||||| || ||| | || ||||| ||
Sbjct 59629 GTCTCAAAAATTTGCTGGTTCAAGCGC-TGGGCCTCAGGACTTTCGAAAGG-ATACCTCA 59572
Query 65799 TCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAAT 65858
||| || |||| || |||||||| || || ||||| || |||||||| || || |
Sbjct 59571 TCAAGATGAAAGCATCTGCCAGACCCTGCACACCAATGCCAATGGGACGGTGGCGTCTGT 59512
Query 65859 TGGAACGT 65866
|||| |||
Sbjct 59511 TGGAGCGT 59504
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395984400681920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |