Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 2e-23
>seq1
Length=30727332
Score = 114 bits (126), Expect = 2e-23
Identities = 168/229 (73%), Gaps = 14/229 (6%)
Strand=Plus/Plus
Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70
||||||| || ||||| |||||| ||||| | ||||||||||||| ||||||| | |
Sbjct 1873749 CAGGGACTTAATCAACATGAGCTT-ATGACCCAAACTTACTAGGAATT-CCTCGTTCAGG 1873806
Query 71 ACCAACAATTGCAATGATCT-ATCCCCATCACGATGAAAT----TTCAAAGA-TTACCCG 124
|| |||||||| | || |||||| |||| |||| ||||| | |||||||
Sbjct 1873807 GGGAAAAATTGCAAC-ACCTGATCCCCTTCAC----AAATGGGGTTCAATGGGTTACCCG 1873861
Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184
|||| ||| ||| | || | ||| ||||||||||| | |||| ||||
Sbjct 1873862 TGCCTGCCGGTGCAGGGTAGGCACAAGCTGAGCCGGTCAGTGTAGCGTGTGTGCAGCCCC 1873921
Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
| |||||||||||||||||||||||||||||| ||||| || |||||
Sbjct 1873922 GGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1873969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751991680530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |