Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-23 >seq1 Length=30727332 Score = 114 bits (126), Expect = 2e-23 Identities = 168/229 (73%), Gaps = 14/229 (6%) Strand=Plus/Plus Query 11 CAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAG 70 ||||||| || ||||| |||||| ||||| | ||||||||||||| ||||||| | | Sbjct 1873749 CAGGGACTTAATCAACATGAGCTT-ATGACCCAAACTTACTAGGAATT-CCTCGTTCAGG 1873806 Query 71 ACCAACAATTGCAATGATCT-ATCCCCATCACGATGAAAT----TTCAAAGA-TTACCCG 124 || |||||||| | || |||||| |||| |||| ||||| | ||||||| Sbjct 1873807 GGGAAAAATTGCAAC-ACCTGATCCCCTTCAC----AAATGGGGTTCAATGGGTTACCCG 1873861 Query 125 GACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCA 184 |||| ||| ||| | || | ||| ||||||||||| | |||| |||| Sbjct 1873862 TGCCTGCCGGTGCAGGGTAGGCACAAGCTGAGCCGGTCAGTGTAGCGTGTGTGCAGCCCC 1873921 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 1873922 GGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 1873969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751991680530