Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq93 138 2e-30 seq51 89.7 9e-16 >seq93 Length=4375509 Score = 138 bits (152), Expect = 2e-30 Identities = 201/279 (72%), Gaps = 5/279 (2%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||||||| ||| |||| | | ||| | | | |||||||||| ||||||||||||| Sbjct 1565330 ATGCCCTTAGCTGAGTGTCCTACAGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 1565389 Query 98 TCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGGAATAATAGAATAGGACG--TGCGG 154 ||||||||||| || | |||| ||| |||||||| ||||||||| | | | Sbjct 1565390 TCAAAGCAGGCTGGCCGCCGGCATACTGCAGCTAGGAATAATGGAATAGGACTCCTCCAG 1565449 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCA 214 ||||||||||||||| | || | | | || ||||| |||||| |||||| | Sbjct 1565450 TTCTATTTTGTTGGTCTTCAGAAACAGGGCCATAATTAAGAGGGATGCCCGGGGGCATTC 1565509 Query 215 GTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCG 274 ||||| | |||||||||||||||||| | ||||| ||| | |||||| Sbjct 1565510 GTATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGTGCAAGACGGTCTAGAGTGAAAGCA 1565569 Query 275 TTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 || ||||| |||||||||||||||| ||| ||||||| Sbjct 1565570 TTTGCCAAGAATGTTTTCATTAATCA-AGAATGAAAGTT 1565607 >seq51 Length=7971058 Score = 89.7 bits (98), Expect = 9e-16 Identities = 131/180 (73%), Gaps = 4/180 (2%) Strand=Plus/Plus Query 140 GAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGA 199 ||||||||| | | ||| |||||||||||||| | | | | | |||||||| ||||| Sbjct 259218 GAATAGGAC-TCCAGTTATATTTTGTTGGTTTTTGGAAACAGGGCCATGATTAAGAGGGA 259276 Query 200 TAGTCGGGGGTGTCAGTATTCAATTG-TCAGAGGTGAAATTCTTGGATTTATTGAAGACT 258 | | |||| || ||||| || ||| |||||||||||||||| | | ||| Sbjct 259277 TGGCTGGGGTCATCTGTATTGTGCTGCTCA-AGGTGAAATTCTTGGACTCGTGCGAGATG 259335 Query 259 AACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAGGGG 318 ||| | |||||| || ||||| ||||||||||||||||| || |||||| || || Sbjct 259336 GCCTAGAGTGAAAGCATTTGCCAAGAATGTTTTCATTAATCAG-AAATGAAAGTCAGAGG 259394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915189548416