Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq119 84.2 3e-14 seq1 84.2 3e-14 seq20 73.4 6e-11 >seq119 Length=2995743 Score = 84.2 bits (92), Expect = 3e-14 Identities = 72/88 (82%), Gaps = 6/88 (7%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||| | | |||| ||| |||||||||||||||||||||||| |||| Sbjct 998520 CTAGTTAGCATGCCA--GTCTTGTTTGTTATCGGAATTAACCAGACAAATTGCTCC---- 998573 Query 202 ACTAAGAACGGCCATGCACCACCACCCA 229 ||||||||| ||||||||||||||||| Sbjct 998574 ACTAAGAACCACCATGCACCACCACCCA 998601 >seq1 Length=30727332 Score = 84.2 bits (92), Expect = 3e-14 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Plus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 |||||||||||| | |||| |||| | |||||||||||||||||||||||||||||| || Sbjct 1873897 GTCAGTGTAGCGTGTGTGCAGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 1873955 Query 75 CAAACT 80 ||| || Sbjct 1873956 CAATCT 1873961 >seq20 Length=13035929 Score = 73.4 bits (80), Expect = 6e-11 Identities = 70/90 (78%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235 |||||||||||| ||| |||| || ||||||| | ||||| ||||| ||||| ||| Sbjct 2237789 AATTAACCAGACTAATTGGTCCATCAGCTAAGAATGTCCATGGACCACTACCCAAGAAAT 2237848 Query 236 CAAGAAAGAGCTATCAATCTGTCCTCCCTC 265 ||||||| ||||| || || ||| |||| Sbjct 2237849 CAAGAAAAAGCTAACATTCCTTCCATCCTC 2237878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796791184902