Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq99 343 3e-92
seq302 329 6e-88
seq93 288 2e-75
seq137 120 5e-25
seq2 80.6 5e-13
seq29 78.8 2e-12
>seq99
Length=4051934
Score = 343 bits (380), Expect = 3e-92
Identities = 254/295 (86%), Gaps = 1/295 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| | || |||||||||||||||||||||||||||||
Sbjct 2964113 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 2964054
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 2964053 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 2963994
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2963993 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 2963934
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 2963933 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 2963874
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294
| ||| | | | |||||||| ||||| | |||||| ||| ||||||||
Sbjct 2963873 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTCA 2963819
>seq302
Length=58831
Score = 329 bits (364), Expect = 6e-88
Identities = 250/294 (85%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| | || |||||||||||||||||||||||||||||
Sbjct 23648 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 23707
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 23708 ACGACAGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 23767
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 23768 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 23827
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 23828 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 23887
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | | |||||||| ||||| | |||||| || |||| ||
Sbjct 23888 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACAGTCTGTAGTC 23941
>seq93
Length=4375509
Score = 288 bits (318), Expect = 2e-75
Identities = 241/294 (82%), Gaps = 1/294 (0%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| | || |||||||||||||||||||||||||||||
Sbjct 325810 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 325869
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||| ||||||||| ||||||| |||||||||||||||||| |||||| |
Sbjct 325870 GCGGCGGTCTAATCCCAGCTCATGTTCCCTGTTAGTGGGTGAACAATCCCACGCTTGGTG 325929
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
| |||||||||| ||||||| ||||||| ||||||||| |||||||||||| ||| |||
Sbjct 325930 AGTTCTGCTTCGCAATGATAGAAAGAGCCAACATCGAAGAATCAAAAAGCAAAGTCACTA 325989
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
||||||||||||||| |||||||| ||||||||||||||||||||||| |||||| ||
Sbjct 325990 TGAACGCTTGGCTGCTACAAGCCAATTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 326049
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | | |||| || ||||| | |||||||||| |||||||
Sbjct 326050 TGAAACCCAAAAAGCCAGAAGGGTCACGAGGCCCCGCTTTCATGGTCTGTATTC 326103
>seq137
Length=2255300
Score = 120 bits (132), Expect = 5e-25
Identities = 83/93 (89%), Gaps = 1/93 (1%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
||||||||||||||||||||||||||||||||| ||||| |||||| ||||| |||||||
Sbjct 253006 TCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCT-AACCCAACTCACATTCCCTA 253064
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATT 123
|||||||||||||||| || | ||| |||||
Sbjct 253065 TTAGTGGGTGAACAATTCAGCACTTGGAGAATT 253097
>seq2
Length=24686930
Score = 80.6 bits (88), Expect = 5e-13
Identities = 55/61 (90%), Gaps = 1/61 (2%)
Strand=Plus/Minus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|||||||| ||||||| ||||||||||||||| ||||| ||||||||||| ||||||| |
Sbjct 6923609 CATCAGTAAGGTAAAAATAACCTGTCTCATGATGGTCT-AACCCAGCTCATGTTCCCTCT 6923551
Query 92 T 92
|
Sbjct 6923550 T 6923550
>seq29
Length=10606836
Score = 78.8 bits (86), Expect = 2e-12
Identities = 182/267 (68%), Gaps = 12/267 (4%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCC--AGCTCACGTTCCC 88
|| |||| ||| |||||||||| ||||| | | | |||||||||| | || ||||
Sbjct 5898976 TCGTCAGGAGGATAAAACTAACTTGTCTTAGGGCAGTCTAAACCCCCAACTTGTGTTCAT 5898917
Query 89 TATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCC 148
| ||| ||||| | | ||||||||| |||||||| || | ||| ||||| ||
Sbjct 5898916 TGTTAATGGGTAAGTGA-CCAACGCTTGGTGAATTCTGTTTTGTGGTGACAGGAAAAGTT 5898858
Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208
|| || |||| | || | ||| | |||| | ||| | || || | ||| |
Sbjct 5898857 CACGTCAAAGGGTTGAA--GTAACTTTGCTAATAG---TTGACCACCGCAGGGTGGTTTT 5898803
Query 209 CC-CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACT-AAAGGATCGA 266
| |||| |||||||||||| || |||| || | ||| | ||| | | | | ||||
Sbjct 5898802 TCTCTGTTGTAACTTTTCTGACATCTCTTGCTTAAAA--CCTAGGAAGTCAGAAGATCCT 5898745
Query 267 TAGGCCACACTTTCATGGTTTGTATTC 293
|||||||||| ||||| |||||||
Sbjct 5898744 GAGGCCACACTAGCATGGCCTGTATTC 5898718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 854390242752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |