Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201 4-10-14] 1,142 sequences; 1,192,743,076 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1 125 1e-26 seq129 78.8 2e-12 >seq1 Length=30727332 Score = 125 bits (138), Expect = 1e-26 Identities = 157/214 (73%), Gaps = 1/214 (0%) Strand=Plus/Minus Query 106 AGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTAC 165 || ||||| |||||||||||||||||||||||||||||| | |||| |||| | |||||| Sbjct 1873961 AGATTGAG-CAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACACACGCTAC 1873903 Query 166 ACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACT 225 |||||| | || | || | | ||| |||| ||| |||||| | | || | Sbjct 1873902 ACTGACCGGCTCAGCTTGTGCCTACCCTGCACCGGCAGGCACGGGTAACCCATTGAACCC 1873843 Query 226 CTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAG 285 | | ||| |||||| | |||||||| || | | | |||||||||| ||||||||| Sbjct 1873842 CATTTGTGAAGGGGATCAGGTGTTGCAATTTTTCCCCCTGAACGAGGAATTCCTAGTAAG 1873783 Query 286 CGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319 | ||||| ||| | |||||||| ||||||| Sbjct 1873782 TTTGGGTCATAAGCTCATGTTGATTAAGTCCCTG 1873749 >seq129 Length=2569322 Score = 78.8 bits (86), Expect = 2e-12 Identities = 76/98 (78%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 231 GTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGT 290 ||| ||||||| | | |||||||||||| | | | || ||||||| || |||||| | | Sbjct 1588669 GTGATGGGGATTGGGGATTGCAATTATTCCCCATGAATGAGGAATTCCCAGTAAGTGTGG 1588728 Query 291 GTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 | ||| | | ||| ||||||| |||||||| |||||| Sbjct 1588729 GGCATAAACTCGCTTTGATTAAGTCCCTGCTTTTTGTA 1588766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947189182976