Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq99 304 4e-80
seq302 293 8e-77
seq260 221 4e-55
seq123 131 5e-28
seq47 86.0 2e-14
seq93 80.6 9e-13
seq78 77.0 1e-11
>seq99
Length=4051934
Score = 304 bits (336), Expect = 4e-80
Identities = 185/196 (94%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| |||||| | | ||||||||||||||||||
Sbjct 2963508 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACAGCGCCAGACTAGAGTCAAGCTCAA 2963449
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 2963448 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 2963389
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2963388 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 2963329
Query 417 ACGAGGCATTTGGCTA 432
||||||||||||||||
Sbjct 2963328 ACGAGGCATTTGGCTA 2963313
>seq302
Length=58831
Score = 293 bits (324), Expect = 8e-77
Identities = 349/483 (72%), Gaps = 58/483 (12%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| |||| || |||| |||| | ||||||||||||||||||| |
Sbjct 23975 CTTCTGCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 24034
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||| |||| ||| ||||||||| ||||||||||||||| | |||| | ||| ||
Sbjct 24035 CTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGCCGCTGTCCCCGGAGCGGGTC 24094
Query 127 G------GCCCGCGAAGGAC-CTTAACGCCAGAAAATGG--------TCGGTGAAGACCA 171
| || |||| || | ||| |||||||| | |||| | ||
Sbjct 24095 GCGCCCGGCGCGCGCCGGGCGCTTGGCGCCAGAAGCGAGAGCCCCCCTCGGGGCTCGCCC 24154
Query 172 GTTCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCAC--------- 222
|||| ||| | ||||| |||||||||| || ||||||||||||| |
Sbjct 24155 CC-CCGCCTCACCGGGTAAGTGAAAAAACGATCAGAGTAGTGGTATTTCCCCGACGGCCG 24213
Query 223 -----------------TTGCGCCGAAACGGC----------------TCCCACTTATTC 249
| || ||| | || | ||||||||||||
Sbjct 24214 GGACGCCGGCGGGCGGGTCGCCCCGCACCGCCAAGCGCGCGCCCGGCCTCCCACTTATTC 24273
Query 250 TACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTT 309
||||||||||| || |||||| | | |||||||||||||||||||| |||||||||
Sbjct 24274 TACACCTCTCATGTGTCTTCACAGCGCCAGACTAGAGTCAAGCTCAACATTGTCTTCTTT 24333
Query 310 CCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG 369
|||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||
Sbjct 24334 CCCCGCTGATTCTGCCAAGCCCATTCCCTTGGCTGTGGTTTCGCTGGATAGTAGGTAGGG 24393
Query 370 ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 429
||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 24394 ACAGTGGGAATCTTGTTCGTCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGG 24453
Query 430 CTA 432
|||
Sbjct 24454 CTA 24456
Score = 156 bits (172), Expect = 1e-35
Identities = 96/101 (95%), Gaps = 1/101 (1%)
Strand=Plus/Plus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 30814 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTT 30873
Query 494 GACATTCAGAGCACT-GGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||| ||||||||||||||| || ||||||
Sbjct 30874 GACATTCAGAGCACTGGGGCAGAAATCACATCGCATCAACA 30914
>seq260
Length=133905
Score = 221 bits (244), Expect = 4e-55
Identities = 169/200 (85%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA- 295
|||||| |||||||| ||||| | || || || | | |||| |||||| |||
Sbjct 119910 CTCCCATTTATTCTATTCCTCTGATGTTTCTTTGCAGTGCCAGACTGGAGTCATGCTTCT 119851
Query 296 ---ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCG 352
||||||||||||||||| |||||||| |||||||| |||| |||||||||||||| |
Sbjct 119850 TTCACAGGGTCTTCTTTCCCTGCTGATTCTGCCAAGCCTGTTCTCTTGGCTGTGGTTTTG 119791
Query 353 CTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTA 412
|| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 119790 CTGGATAGTAAGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTA 119731
Query 413 GATGACGAGGCATTTGGCTA 432
||||||||||||||||||||
Sbjct 119730 GATGACGAGGCATTTGGCTA 119711
>seq123
Length=2850928
Score = 131 bits (144), Expect = 5e-28
Identities = 75/77 (97%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2061675 GATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGAT 2061734
Query 416 GACGAGGCATTTGGCTA 432
|||||||||||||||||
Sbjct 2061735 GACGAGGCATTTGGCTA 2061751
>seq47
Length=8633692
Score = 86.0 bits (94), Expect = 2e-14
Identities = 69/82 (84%), Gaps = 1/82 (1%)
Strand=Plus/Minus
Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493
||||| | |||||||| || | | ||| ||| ||| |||| ||||||||||||||||
Sbjct 1893200 CTTAAAA-AGTCATAGATATTTCTGCCTTTTTCCCATGCTTCACTGAATTTCTTCACTTT 1893142
Query 494 GACATTCAGAGCACTGGGCAGA 515
||||||||||||||||||||||
Sbjct 1893141 GACATTCAGAGCACTGGGCAGA 1893120
>seq93
Length=4375509
Score = 80.6 bits (88), Expect = 9e-13
Identities = 82/107 (77%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| |||||| | |||| |||| | |||| |||| | ||||||||||||||||||| |
Sbjct 326137 CTTCTGCTCTGCGGGAGGTTTCCGACCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACG 326196
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
||| ||| || ||||||||| ||||| |||| | || | ||||
Sbjct 326197 CTTTGGCAGGGGTACCGCCCCAGTCAAACCCCCCGCTTGCCGCTGTC 326243
>seq78
Length=5498149
Score = 77.0 bits (84), Expect = 1e-11
Identities = 77/100 (77%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| | ||| | |||| |||| || |||| |||| | |||||||| ||||| |||
Sbjct 3506204 CTTCTCCTCCGCGGGAGGTTTCCGTCCTCCCTGAGCTCACCTTAGGAGACCTGTCTTACA 3506263
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGA 106
|||| | | ||| || |||||||||||||||||||||||
Sbjct 3506264 GTTTGATTGGTGTACCACCCCAGCCAAACTCCCCACCTGA 3506303
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635181326016
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |