Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aquila_20chrysaetos_20canadensis_20[refseq_20GCF_5F000766835.1_20201
4-10-14] 1,142 sequences; 1,192,743,076 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq49 98.7 8e-16
seq6 89.7 4e-13
seq20 86.0 5e-12
>seq49
Length=8140862
Score = 98.7 bits (108), Expect = 8e-16
Identities = 106/137 (77%), Gaps = 4/137 (3%)
Strand=Plus/Minus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
||| || |||||||| ||||||||||| |||| || || | ||||| ||||| || |
Sbjct 7587290 CATGAAGAGATCAGGAATCCAGAGGGCAAAGAAAAGGTCTCTGGCTCGCTGCTCTTCTTT 7587231
Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458
|| ||| || || ||||| || |||||||||||||| ||||||||| |||||||
Sbjct 7587230 CCCAGTG-TTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAAATGCCATGGCTCCAGGT 7587172
Query 66459 AGATGGCGAACGAGCCC 66475
||||||| || |||||
Sbjct 7587171 AGATGGCAAA--AGCCC 7587157
>seq6
Length=21260008
Score = 89.7 bits (98), Expect = 4e-13
Identities = 90/117 (77%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
||| |||||| ||||||||||| | | || || ||||||||||| ||||| ||||
Sbjct 17296694 TGGCACGTTTTAGTCAGGAGGTGCAGATCCCAGAAGCTCGTTGTTTCTATGGCTTTCAGA 17296753
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372
|| || ||||| || ||||| ||||||||||| | ||||| || || |||||||
Sbjct 17296754 TTCTTATTGAGAACGTTCACTCAGAGATGTACAGCTTGCTCATAGACACCTACATCA 17296810
>seq20
Length=13035929
Score = 86.0 bits (94), Expect = 5e-12
Identities = 88/115 (77%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315
|||| || ||| || || || ||| | | || || || |||||||| ||||||||||
Sbjct 5725010 TGGAGCGGTTCAGTCAAGAAGTACAAATCACAGAAGCTCGCTGTTTCTATGGCTTCCAGA 5724951
Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370
|||||||||| ||| | || || || ||||||||| |||| || || || |||||
Sbjct 5724950 TTGCCATGGAAAATATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACAT 5724896
Score = 82.4 bits (90), Expect = 6e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101
|| || || || || ||||| | ||||||||| |||| | || || |||| ||||||
Sbjct 5725857 GACAACCCCCGCCGCTTCGTCGTCTTCCCCATCCAGTACCACGACATCTGGCAGATGTAC 5725798
Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139
|| ||||| || || ||||||||||||| |||||||||
Sbjct 5725797 AAGAAGGCCGAGGCCTCCTTCTGGACGGCGGAGGAGGT 5725760
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397562466598880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |