Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq21626 136 2e-29 seq179228 87.8 7e-15 seq31202 87.8 7e-15 >seq21626 Length=9862 Score = 136 bits (150), Expect = 2e-29 Identities = 99/115 (86%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| Sbjct 8971 GGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGA 8912 Query 629 GGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || || |||||| ||| ||||||||||| ||||| | |||| ||||||||| Sbjct 8911 GGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCCGGGTCTAGGGGCGA 8857 Score = 127 bits (140), Expect = 8e-27 Identities = 124/160 (78%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||| ||||||||||||| | || ||| |||||| | | ||||| ||||||| Sbjct 332 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 273 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | ||| |||||||||||| ||||||| || | ||||| ||||||| |||||| | Sbjct 272 ACCGGCACGAGACCGATAGCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 213 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199 |||||||| || || ||||||| ||| | ||| || || Sbjct 212 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 173 >seq179228 Length=9975 Score = 87.8 bits (96), Expect = 7e-15 Identities = 81/103 (79%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 554 AGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGA 613 ||||||| || | | ||| ||||||||||| ||||||||| ||||||| |||||| Sbjct 793 AGAGCATCCGTGCTAGCACCTAAAAGATGGTGAGCTATGCCTGGGCAGGGTGATGCCAGA 852 Query 614 GGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATC 656 |||| |||||||||||| | ||| || ||| | |||||||| Sbjct 853 AGAAAGTCTGGTGGAGGCCTGTAGCAGTCCTGACATGCAAATC 895 >seq31202 Length=10742 Score = 87.8 bits (96), Expect = 7e-15 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111 ||||||||||||| | ||||| | |||||| | | | ||| ||||| || | || ||| Sbjct 2522 TTGGGAATGCAGCCCAAAATGTGTGGTAAACTACATTTAAGGCTAATTACTAGCACAAGA 2463 Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAA 171 | |||||| ||||||| ||| | ||||| |||||| |||||| | |||||| | || Sbjct 2462 CTGATAGCTAACAAGTACAGTAAGAGAAAGTTGAAAATAACTTTGAAGAGAGAGCTCAAG 2403 Query 172 AGCACGTGAAA 182 || |||||| Sbjct 2402 AGGGTGTGAAA 2392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2075864654500