Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26]
192,790 sequences; 1,204,700,227 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq21627 342 9e-92
seq17438 102 1e-19
seq26183 73.4 7e-11
>seq21627
Length=616
Score = 342 bits (378), Expect = 9e-92
Identities = 253/294 (86%), Gaps = 1/294 (0%)
Strand=Plus/Minus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59
|||| ||| | ||||| |||| | || |||||||||||||||||||||||||||||
Sbjct 421 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 362
Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119
| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 361 ACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTGGTG 302
Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 301 AATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTA 242
Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCC 239
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 241 TGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCCTGCT 182
Query 240 TCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTC 293
| ||| | | | |||||||| ||||| | |||||| ||| |||||||
Sbjct 181 TAAAACCCAAAAAGCCAGAAGGATCGTGAGGCCCCGCTTTCACGGTCTGTATTC 128
>seq17438
Length=25120
Score = 102 bits (112), Expect = 1e-19
Identities = 77/91 (85%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178
|||||||||||| |||| ||||||| |||| |||||||||||||||||| | |||
Sbjct 6539 GAATTCTGCTTCACAGTGATGGGAAGAGATGACACTGAAGGATCAAAAAGCAACATTGCT 6598
Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATC 209
||||| ||||| ||||||||||||||||||
Sbjct 6599 GTGAACACTTGGATGCCACAAGCCAGTTATC 6629
>seq26183
Length=7879
Score = 73.4 bits (80), Expect = 7e-11
Identities = 57/68 (84%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||| ||||||||||||| ||||||||||| || | ||||||||| | ||| |||| |
Sbjct 3955 TCATGAGTAGGGTAAAACCAACCTGTCTCACAACAGCCTAAACCCACCACACATTCCTTG 3896
Query 91 TTAGTGGG 98
||||||||
Sbjct 3895 TTAGTGGG 3888
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 852752802240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |