Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ara_20macao_20[genbank_20GCA_5F000400695.1_202013-06-26] 192,790 sequences; 1,204,700,227 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq156245 111 1e-19 seq17506 98.7 8e-16 seq38092 93.3 3e-14 seq64820 91.5 1e-13 >seq156245 Length=697 Score = 111 bits (122), Expect = 1e-19 Identities = 124/162 (77%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| || ||||| || ||||| |||||||||| ||||| || Sbjct 367 GGTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTG 308 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| | ||||| | || ||||| | |||||| || ||||| |||||| || Sbjct 307 GTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCTGTCTCAGTCTG 248 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCACC 66208 ||||||||||||| || || ||||| || | ||||||||| Sbjct 247 CGACTCAATGATGGAGTACC--AGAGCTGCTGGGCCTTCACC 208 >seq17506 Length=29135 Score = 98.7 bits (108), Expect = 8e-16 Identities = 92/117 (79%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 ||| |||||| ||||||||||| | | || || ||||||||||| ||||| |||| Sbjct 2883 TGGCACGTTTTAGTCAGGAGGTGCAGATCCCAGAAGCCCGTTGTTTCTATGGCTTTCAGA 2824 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || ||| ||||| |||||||| ||||||||||| | ||||| || || ||||||| Sbjct 2823 TTCTCATTGAGAACGTCCACTCAGAGATGTACAGCTTGCTCATAGACACCTACATCA 2767 >seq38092 Length=14860 Score = 93.3 bits (102), Expect = 3e-14 Identities = 105/137 (77%), Gaps = 4/137 (3%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| ||||| || || |||| || || | ||||||||||| || | Sbjct 13564 CATGAAGAGATCAGGAATCCAAAGCGCAAAGAAAAGGTCTCTGGCTCGTTGCTCTTCTTT 13505 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || |||||| || |||||||||||||| |||||| || ||||||| Sbjct 13504 CCCAGTG-TTCTTCTTCAAGTCCAGAAACTCAAAGATGTCCAAATGCCAGGGCTCCAGGT 13446 Query 66459 AGATGGCGAACGAGCCC 66475 ||||||| || ||||| Sbjct 13445 AGATGGCAAA--AGCCC 13431 >seq64820 Length=6338 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || |||||||| | || || || |||||||| |||||||||| Sbjct 1246 TGGAGCGGTTCAGTCAAGAAGTGCAAGTCACAGAAGCTCGCTGTTTCTATGGCTTCCAGA 1305 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||||||||| || | || || || ||||||||| |||| || || || ||||| Sbjct 1306 TTGCCATGGAAAACATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACAT 1360 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396633863045600