Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20 2014-06-25] 53,491 sequences; 1,127,622,302 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq25071 159 6e-37 >seq25071 Length=554 Score = 159 bits (176), Expect = 6e-37 Identities = 196/264 (74%), Gaps = 3/264 (1%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| ||| || ||| | | | |||||||||| ||||||||||||| Sbjct 447 ATGCTCTTAGCTGAGTGTCCCGTGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 388 Query 98 TCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 |||||||||||| || |||| ||| |||||||| ||||||||| | ||||| Sbjct 387 TCAAAGCAGGCCGGCCACCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 329 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | | | |||||||| ||||| || |||||| | || Sbjct 328 CTATTTTGTTGGTTTTCGGAAACAGGGCCATGATTAAGAGGGACAGCCGGGGGCATTCGT 269 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| || |||||||||||||||||| ||||| ||| | |||||| || Sbjct 268 ATTGTGCTGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGTGAAAGCATT 209 Query 277 CACCAAGGATGTTTTCATTAATCA 300 ||||| |||||||||||||||| Sbjct 208 TGCCAAGAATGTTTTCATTAATCA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914710450368