Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq25071 159 6e-37
>seq25071
Length=554
Score = 159 bits (176), Expect = 6e-37
Identities = 196/264 (74%), Gaps = 3/264 (1%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| ||| || ||| | | | |||||||||| |||||||||||||
Sbjct 447 ATGCTCTTAGCTGAGTGTCCCGTGGGGCCCGAAGCGTTTACTTTGAGAAAATTAGAGTGT 388
Query 98 TCAAAGCAGGCCTTTGCTCGA-ATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156
|||||||||||| || |||| ||| |||||||| ||||||||| | |||||
Sbjct 387 TCAAAGCAGGCCGGCCACCGGCATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 329
Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216
||||||||||||||| | | | | |||||||| ||||| || |||||| | ||
Sbjct 328 CTATTTTGTTGGTTTTCGGAAACAGGGCCATGATTAAGAGGGACAGCCGGGGGCATTCGT 269
Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276
||| || |||||||||||||||||| ||||| ||| | |||||| ||
Sbjct 268 ATTGTGCTGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGGCCTAGAGTGAAAGCATT 209
Query 277 CACCAAGGATGTTTTCATTAATCA 300
||||| ||||||||||||||||
Sbjct 208 TGCCAAGAATGTTTTCATTAATCA 185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914710450368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |