Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20
2014-06-25] 53,491 sequences; 1,127,622,302 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq45128 185 1e-44
seq40818 143 4e-32
seq5921 73.4 6e-11
>seq45128
Length=378
Score = 185 bits (204), Expect = 1e-44
Identities = 175/220 (80%), Gaps = 14/220 (6%)
Strand=Plus/Plus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||||| |||| |||| | ||||||||||| |||||||||||||||||| |
Sbjct 165 GTCAGTGTAGCGCGTGTGCAGCCCCGGACATCTAAGGGTGTCACAGACCTGTTATTGC-T 223
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTC 134
||| || | |||||| | |||| | |||||||||||||| | |||| | | ||
Sbjct 224 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACACCGAGCGC--TC 280
Query 135 GATGGGG--------CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGA 186
| |||| ||| |||||| | | |||||||||||||| |||||||||||||
Sbjct 281 G--GGGGTCACGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATTGGAATTAACCAGA 338
Query 187 CAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAC 226
|||||| |||||||||||||||||||||||||||||| ||
Sbjct 339 CAAATCGCTCCACCAACTAAGAACGGCCATGCACCACAAC 378
>seq40818
Length=86873
Score = 143 bits (158), Expect = 4e-32
Identities = 103/119 (87%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205
|||||| | | |||||||||||||| | |||||||||| ||||||||||||||||||||
Sbjct 69760 TTAGCATGCCAGGGTCTCGTTCGTTAGCAGAATTAACCACACAAATCACTCCACCAACTA 69701
Query 206 AGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTCCTCCCT 264
|||||||||||| ||||||||| | ||||| |||||||||| ||| |||||| ||||
Sbjct 69700 AGAACGGCCATGAACCACCACCTGTGGAATCGAGAAAGAGCTCTCAGTCTGTCAGCCCT 69642
>seq5921
Length=161387
Score = 73.4 bits (80), Expect = 6e-11
Identities = 60/73 (82%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 176 AATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAAT 235
|||||||||||| ||| |||| || ||||||| ||||||||||||||||| |||
Sbjct 149803 AATTAACCAGACTAATTGCTCCGTCAGCTAAGAATAACCATGCACCACCACCCAAGAAAT 149744
Query 236 CAAGAAAGAGCTA 248
||||||| |||||
Sbjct 149743 CAAGAAAAAGCTA 149731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796387102971
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |