Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20 2014-06-25] 53,491 sequences; 1,127,622,302 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq25071 96.9 4e-18 >seq25071 Length=554 Score = 96.9 bits (106), Expect = 4e-18 Identities = 128/174 (74%), Gaps = 3/174 (2%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC-TTTGCTCGAATACATTACCATGG 71 |||||||||| |||||||||| |||||||||||||| | | |||| | | || Sbjct 411 TTTACTTTGAGAAAATTAGAGTGTTCAAAGCAGGCCGGCCACCGGCATACTGCAGCTAGG 352 Query 72 AATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||| ||||||||| | |||||||||||||| ||||| | ||| | ||||| Sbjct 351 AATAATGGAATAGGAC-TCCGGTTCTATTTTGTTGGTTT-TCGGAAACAGGGCCATGATT 294 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185 || | ||| || |||||| | ||||| || | |||||||||||||||| Sbjct 293 AAGAGGGACAGCCGGGGGCATTCGTATTGTGCTGCTAGAGGTGAAATTCTTGGA 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511734684640