Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Balearica_20regulorum_20gibbericeps_20[refseq_20GCF_5F000709895.1_20 2014-06-25] 53,491 sequences; 1,127,622,302 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq45128 167 4e-39 >seq45128 Length=378 Score = 167 bits (184), Expect = 4e-39 Identities = 194/258 (75%), Gaps = 3/258 (1%) Strand=Plus/Minus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 263 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 206 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 | ||||||||||| | |||| |||| |||||||||||||| | || | || | | Sbjct 205 ACACCCTTAGATGTCCGGGGCTGCACACGCGCTACACTGACTGGCTCAGCTTGTGCCTAC 146 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| || || ||| |||||| || || | | ||||| ||||||| | | |||| Sbjct 145 CCTCCGCTGGCAGGCGCGGGTAACCTGTCGAACCCCATTCGTGATGGGGATCGGGGATTG 86 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || |||||| ||| |||| ||| ||| |||||| Sbjct 85 CAATTCTTCCCCATGAACGAGGAATTCCCAGTAAGTGCGGATCATAAGCTCGCATTGATT 26 Query 311 ACGTCCCTGCCCTTTGTA 328 | |||||||||||||||| Sbjct 25 AAGTCCCTGCCCTTTGTA 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946693333248